Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq2029 138 2e-28 >seq2029 Length=231691 Score = 138 bits (152), Expect = 2e-28 Identities = 178/246 (72%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 2030 ACCTTGTTGGTCAGTCCATTTGCGGGTTTTTAACTTGCCTTCAATGTATAGCTTACTACC 2089 |||||| || ||||||||||| ||||||| || |||||| | || ||||| ||| Sbjct 11511 ACCTTGCTGATCAGTCCATTTACGGGTTTGTAGACGGCCTTCTACATACAGCTTTGAACC 11570 Query 2090 CTTACGTACATACTCGCCGATTATTTCAGCTAACTTTCCAAAAACAACAATTCTGTGCCA 2149 ||| | ||||| | || | |||||||||||||| ||||| | || | | |||||| Sbjct 11571 TTTATGCACATATTGCCCAACGATTTCAGCTAACTTACCAAAGAATACTACGCGGTGCCA 11630 Query 2150 CTCGGTTTCTTCTTTTGGCTCGCCAGTGCTTTTATCCTTCCATTTTTCGCTAGTTGCTAG 2209 ||||| ||| | | | || ||||| ||||||| |||||| || ||| |||| Sbjct 11631 TTCGGTACGTTCCTGTTGTTCACCAGTATTTTTATCTTTCCATGCGTCAGAAGTGGCTAA 11690 Query 2210 AGTTAGGTTTGCCACTGCATTTCCGTTAGGTATGTAACGAATTTCTGGATCTTGACCAGC 2269 || | |||| |||||||| |||||||| || || || |||||||| || | |||| Sbjct 11691 AGAAACAGTTGCTACTGCATTGCCGTTAGGCATATAGCGCATTTCTGGCTCATTACCAAT 11750 Query 2270 ATTACC 2275 |||||| Sbjct 11751 ATTACC 11756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97932759615152