Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq783 165 2e-35 seq2315 159 8e-34 seq1551 131 4e-25 seq1802 91.5 3e-13 >seq783 Length=580412 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| ||||| || || || || ||||| ||||| |||||||| | |||||||| Sbjct 390346 AGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTTCGG 390287 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || || ||||||||||| || || ||||| | || ||||||||||| ||||||||||| Sbjct 390286 CCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCC 390227 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| |||||||| ||||| ||||| || || |||||| || ||||| | ||| Sbjct 390226 TTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTA 390167 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || || || || | ||||||||| || | |||||| Sbjct 390166 ATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCATT 390128 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| ||| ||||| ||||| || || ||||||||||| ||||| |||| || |||| Sbjct 390118 AGTCGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGT 390059 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || || ||||| | || ||||||||||| ||||||||||| Sbjct 390058 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCC 389999 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || ||||| || ||||| || || || ||||| || || ||||| || || Sbjct 389998 TTATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAACTTCTAGAGTG 389939 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || || || || | ||| || || || | |||||| Sbjct 389938 ATGGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 389900 Score = 140 bits (154), Expect = 7e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || |||||||| || | || ||||| || ||||| | || || || || |||| Sbjct 387247 CTTTCTGTATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGA 387188 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || ||||||||||||||||| || |||||||||||||| || ||| ||||||| Sbjct 387187 TTAATCTCTGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCT 387128 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 ||||||| || ||| ||| ||||| ||||| | || || ||||||| || || |||| Sbjct 387127 CAATGGTATCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGA 387068 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 387067 AAATCTGCAT 387058 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 |||||||| | || | ||| |||||||| || || ||||| ||||| || | || ||| Sbjct 391345 CTGAGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGACAGGGTT 391286 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| || || ||||| || |||||||| || || || |||||||||||||| Sbjct 391285 CGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCC 391226 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 || || || |||||||| || || || || || ||||| ||| || ||||| | Sbjct 391225 TCCTTATCCTGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAA 391166 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || ||||| | ||||| Sbjct 391165 GTGATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| ||||||||||| || | ||||| || ||||| || |||||||| || || |||| Sbjct 390546 CTTTCTGAATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGA 390487 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || ||||||||||| ||||||||||| ||||| ||||| || || ||||| | Sbjct 390486 TCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTT 390427 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | || ||||| ||| || ||||| | || | || || || || | ||||| |||| Sbjct 390426 CGATCGTGTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGA 390367 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 390366 AAATCTGCAT 390357 >seq2315 Length=138946 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| |||||||| |||||||||||||| | ||| || | ||||| |||||||| Sbjct 33195 TGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAAAGTGTGCGACCATCCTCGAGCTGT 33136 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || || |||| || ||||||||||| || || || || |||||||| ||| Sbjct 33135 TTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGGATTCCCTCCTTATCTTGAATCTTT 33076 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || ||||||||||| || ||| ||||||||| | |||| |||||||||||| Sbjct 33075 GCTTTTACATTCTCAATGGTATCTGAAGGTTCCACTTCCAATGTAATTGTCTTTCCTGTC 33016 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || || || || || | ||||| Sbjct 33015 AAGGTCTTCACAAAGATCTGCAT 32993 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| || |||||||| | || || | ||||| || ||||||||||| || |||| Sbjct 27320 CTTTTTGTATGTTGTAATCAGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGA 27261 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 |||||| ||| || || |||||||| ||||| |||||||| || ||| || || || | Sbjct 27260 TAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATCTTTGCTTTTACATTTT 27201 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| || || || ||||||||| | ||| | || ||||| |||||||| || |||| Sbjct 27200 CAATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCAGTCAAAGTCTTAACGA 27141 Query 195131 ACACTTGCATT 195141 | | ||||||| Sbjct 27140 AGATTTGCATT 27130 Score = 136 bits (150), Expect = 9e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||||||||| || || || | ||| || | |||||||| ||||| || |||||||| | Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAA 26908 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || || || || |||||||| || |||||||||||||||||| || || |||| Sbjct 26907 TCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCT 26848 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 ||||||| || || |||||| |||||||| | || || || || | |||||| || | Sbjct 26847 CAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAA 26788 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 26787 AAATCTGCAT 26778 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 |||||||||||||| || | || || | |||||||| | ||| || ||||| || || Sbjct 29148 TTTTGAATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATT 29089 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | ||| || |||||||| || || ||||||||||||||||| ||| ||| || || ||| Sbjct 29088 AATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 29029 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 ||||| || || ||| || || || || | || |||||||| | || || || || Sbjct 29028 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 28969 Query 195133 ACTTGCAT 195140 | ||||| Sbjct 28968 ATCTGCAT 28961 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 |||||||||||||| || | || || | |||||||| | ||| || ||||| || || Sbjct 27707 TTTTGAATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATT 27648 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | ||| || || ||||| || || ||||||||||||||||| ||| ||| || || ||| Sbjct 27647 AATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 27588 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 ||||| || || ||| || || || || | || |||||||| | || || || || Sbjct 27587 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 27528 Query 195133 ACTTGCAT 195140 | ||||| Sbjct 27527 ATCTGCAT 27520 Score = 113 bits (124), Expect = 1e-19 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| |||||||| || | || || | |||||||| | ||| || ||||| || | Sbjct 28211 CTTTTTGGATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 28152 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | ||| || || ||||| || || ||||||||||||||||||||| ||| || || | Sbjct 28151 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTT 28092 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 ||||||| || || ||| || || || || | || || ||||| | || || || | Sbjct 28091 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTCACAA 28032 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 28031 ATATCTGCAT 28022 >seq1551 Length=444118 Score = 131 bits (144), Expect = 4e-25 Identities = 129/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 ||||| || ||||| ||||| ||||| ||||||||||| || | | ||||| ||||| Sbjct 25356 AAAACCAGATGAAGTGTGGATTCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCC 25415 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || |||||||| || || ||||| | || ||||||||||||||||||||||| ||| Sbjct 25416 TCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGAGGAATGCCTTCCTTGCTC 25475 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTC 195095 |||||||| || ||||| | ||| ||||| ||| || ||||| Sbjct 25476 TGAATTTTGGATTTAACGTTTTTAATCGTGTCTGAAGCCTCGACTTC 25522 >seq1802 Length=645375 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 81139 GAAGCTCAAATTCGCCCAAGAAGTGGACTAGCATACAAAAACGGCGTGACTGTTTTGAAC 81198 ||||| || || ||||||||||| || || |||| |||| | || |||||||||||||| Sbjct 418209 GAAGCACAGATACGCCCAAGAAGCGGGCTGGCATTCAAACATGGACTGACTGTTTTGAAC 418268 Query 81199 GCTCCCGGAACCATCGACAGCGATTTCCGTGGCGAAATAAAGGCTTTGATCATCAACCTG 81258 | |||||||| || || || | ||||||||||| | | | ||||| | Sbjct 418269 TCACCCGGAACGATAGATGCAGACTATCGTGGCGAAATTCGTGTGATACTTGTCAACTTA 418328 Query 81259 TCCCAGGAAGACTTTGTCATAAACGACGGCGACAGAATCGCCCAAATGGTTAT 81311 ||| | ||||| ||||| || || |||||||| | || ||| ||||| || Sbjct 418329 TCCAACGAAGAGTTTGTTATTAATGACGGCGAACGTATTTGCCAGATGGTAAT 418381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109129175943464