Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq783 129 4e-25
seq2315 107 1e-18
seq1551 86.0 4e-12
>seq783
Length=580412
Score = 129 bits (142), Expect = 4e-25
Identities = 154/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833
|||| |||| ||| |||||| |||||||| ||||| || ||| ||||| |||| || |
Sbjct 390108 CAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGTCCATCTTCAA 390049
Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893
|||| || |||||||| || | || || |||||| | || | || ||||| || ||
Sbjct 390048 GCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTATCCTGAA 389989
Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
|||| |||||| | | || | || ||||||||| || | || |||||||| |
Sbjct 389988 TCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAACTTCTAGAGTGATGGTTTTGC 389929
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || |||||||||||||| ||||||||
Sbjct 389928 CAGTAAGAGTCTTCACAAAAATCTGCAT 389901
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||| | || | |||||||| | ||| ||| ||||||||||| ||||| ||
Sbjct 391351 CCACCCCTGAGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGAC 391292
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| ||||| |||| || || ||||| || ||||| || || || ||||| ||| | ||
Sbjct 391291 AGGGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 391232
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| |||||||| || ||| || ||| || | | || | || ||||||||
Sbjct 391231 ATGCCCTCCTTATCCTGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACT 391172
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | || |||||||| || || | |||||| || || |||||||||
Sbjct 391171 TCCAAAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCATA 391124
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||||||||| || || ||||| |||| | || || ||||| || || |||||
Sbjct 390320 TTCTTTCTGAATGTTGTAATCTGAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAA 390261
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| | || || |||||| | || | || |||||||| ||| || |||||| |
Sbjct 390260 GATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGAC--A 390203
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || |||| || ||||| || || | || || ||||| || || ||||| ||
Sbjct 390202 TTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTT 390143
Query 34968 ACAAAGATCTGCAT 34981
||||| ||||||||
Sbjct 390142 ACAAAAATCTGCAT 390129
>seq2315
Length=138946
Score = 107 bits (118), Expect = 1e-18
Identities = 140/192 (73%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851
|||| |||||||||||||| ||||| | ||| |||| ||||||||||| || || || |
Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAA 26908
Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911
| | || ||||| || | || | |||||| ||||| ||| || ||| || ||
Sbjct 26907 TCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTAC--ATT 26850
Query 34912 CT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
|| || | ||| | || || || | |||||||||||| || || ||||| |||||
Sbjct 26849 CTCAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCAC 26790
Query 34970 AAAGATCTGCAT 34981
||| ||||||||
Sbjct 26789 AAAAATCTGCAT 26778
Score = 105 bits (116), Expect = 4e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
|| ||||| || |||||||| || | || |||| |||| ||||||||| ||||| |||
Sbjct 29148 TTTTGAATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATT 29089
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
| ||| ||||||||| | || | || || ||||| |||||| || || | |
Sbjct 29088 AATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 29029
Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973
|| | ||| | || || || | || ||||||||||| ||||| |||||||||||
Sbjct 29028 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 28969
Query 34974 ATCTGCAT 34981
||||||||
Sbjct 28968 ATCTGCAT 28961
Score = 98.7 bits (108), Expect = 6e-16
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
|| ||||| || |||||||| || | || |||| |||| |||||| || ||||| |||
Sbjct 27707 TTTTGAATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATT 27648
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
| ||| ||||| ||| | || | || || ||||| |||||| || || | |
Sbjct 27647 AATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 27588
Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973
|| | ||| | || || || | || ||||||||||| ||||| |||||||||||
Sbjct 27587 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 27528
Query 34974 ATCTGCATA 34982
|||||||||
Sbjct 27527 ATCTGCATA 27519
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
||||||||||| || || || ||||| | || |||| || |||||||| || |||||
Sbjct 33183 TCTTTCTGAATATTGTAATCTGAAAGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAA 33124
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| |||| ||||||||| | || | |||||||| || |||||| ||| || ||
Sbjct 33123 ATGAGTCTCTGCTGGTCTGGAGGGATTCCCTCCTTATCTTGAATCTTTGCTTTTAC--AT 33066
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | || | || || || | || || || ||||| || | |||||||
Sbjct 33065 TCTCAATGGTATCTGAAGGTTCCACTTCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCA 33006
Query 34969 CAAAGATCTGCAT 34981
|||||||||||||
Sbjct 33005 CAAAGATCTGCAT 32993
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851
|||| || || || |||||||| || | || |||| |||| |||||| || ||||| |
Sbjct 28211 CTTTTTGGATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 28152
Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911
||| ||| ||||| ||| | || | || || ||||| ||| || || || |
Sbjct 28151 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTT 28092
Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971
| || | ||| | || || || | || |||||||| || ||||| ||||||||||
Sbjct 28091 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTCACAA 28032
Query 34972 AGATCTGCATA 34982
| |||||||||
Sbjct 28031 ATATCTGCATA 28021
>seq1551
Length=444118
Score = 86.0 bits (94), Expect = 4e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||||| ||||||| |||| |||| |||||||||||| || ||||| ||
Sbjct 25341 CCACCTCTCAACCGGAAAACCAGATGAAGTGTGGATTCTTTCTGAATATTGTAGTCTGAC 25400
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| ||| | |||| || ||||| || |||||||| || | || || |||||| | ||
Sbjct 25401 AATGTTCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGAGGA 25460
Query 34875 ACCCCCTCCTTG 34886
| || ||||||
Sbjct 25461 ATGCCTTCCTTG 25472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324535511146176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |