Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq95 86.0 1e-11 seq4222 84.2 4e-11 >seq95 Length=1800565 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178 |||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||| Sbjct 1258697 AATGGCGCGCCCGGCAGGATTCGAACCTGCGACCACCCGCTTAGAAGGCGGGTGCTCTAT 1258638 Query 16179 CC-ACTGAGCTAAGAGCGC 16196 || ||||||||| | |||| Sbjct 1258637 CCAACTGAGCTACGGGCGC 1258619 >seq4222 Length=21366 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 16128 CCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTATCC-ACTGAG 16186 ||| ||||||||||||||||||||| | ||||||||||||| |||||||||| |||||| Sbjct 17817 CCCGACAGGATTCGAACCTGTGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAACTGAG 17758 Query 16187 CTA 16189 ||| Sbjct 17757 CTA 17755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910812051845440