Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_016653.1 Length=46586 Score E Sequences producing significant alignments: (Bits) Value seq1690 82.4 2e-11 seq373 82.4 2e-11 >seq1690 Length=1574822 Score = 82.4 bits (90), Expect = 2e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 45166 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 45225 |||||||| ||||||||||| |||| || | ||||||||||| |||||||||| |||||| Sbjct 1326873 GTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGGTGGTCGGGGGTTCGAATCCCTC 1326932 Query 45226 CGGGC 45230 | ||| Sbjct 1326933 CAGGC 1326937 >seq373 Length=1274844 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 45158 TAGGGCACGTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCG 45217 |||| || ||||||||||||| ||||| ||||||||||| ||| ||||||||||||| Sbjct 836958 TAGGCCA-GTAGCTCAATTGGC-AGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCG 837015 Query 45218 AGTCCCTCCGGGCCTGC 45234 | ||||||| ||||||| Sbjct 837016 ATTCCCTCCTGGCCTGC 837032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148909747315392