Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq95 95.1 3e-15 seq4222 82.4 2e-11 >seq95 Length=1800565 Score = 95.1 bits (104), Expect = 3e-15 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 2813 TGGTGCGGCATGCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCC 2872 ||| ||| | |||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct 1258695 TGGCGCGCCCGGCAGGATTCGAACCTGCGACCACCCGCTTAGAAGGCGGGTGCTCTATCC 1258636 Query 2873 AACTGAGCTA 2882 |||||||||| Sbjct 1258635 AACTGAGCTA 1258626 >seq4222 Length=21366 Score = 82.4 bits (90), Expect = 2e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2825 CAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTA 2882 ||||||||||||||| | || || ||||||||||| |||||||||||||||||||||| Sbjct 17812 CAGGATTCGAACCTGTGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAACTGAGCTA 17755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123630791757984