Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq2340 84.2 8e-12 >seq2340 Length=108680 Score = 84.2 bits (92), Expect = 8e-12 Identities = 122/170 (72%), Gaps = 7/170 (4%) Strand=Plus/Minus Query 52297 AAGCTCCGTCTGGCTGACAACACCTTCTACACCTGCGACTATTTCGTCATGCTCGCGAAC 52356 ||||| ||| |||| ||| ||| ||||||||| || | |||| ||||| | ||| || Sbjct 20046 AAGCTGCGTTTGGCAGACGGCACGTTCTACACCCCGGATTTTTTCCTCATGATGGCGGAC 19987 Query 52357 GGCCAGCTGGAGGCC--CACGAGGTGAAAGGCTTCTGGACCGACGATGCCCGCGTGAAAA 52414 || | | |||| ||||| |||||||||||| ||||| |||||||| |||| Sbjct 19986 GGTA--CCGTAGGCTTTCACGAAACTAAAGGCTTCTGGCGTGACGACGCCCGCGTAAAAA 19929 Query 52415 TCAAGGTCGCGGCCGATCTCTATCC---GTTCCGCTTCATCGCCGTGCAG 52461 |||| | || ||||| || || || |||| ||| | ||||||||| Sbjct 19928 TCAAAATAGCCGCCGAACTGTACCCCATGTTCTTTTTCGTGGCCGTGCAG 19879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194106037383104