Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq714 136 5e-27
>seq714
Length=734366
Score = 136 bits (150), Expect = 5e-27
Identities = 158/212 (75%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498
|||| | ||||| ||||| || |||| ||| |||||||| || |||| |||||| || ||
Sbjct 47749 ATCTCTAATATATGTATCTATAAGTAGACTGTACATTTCTGAATGAACATTTTCCATTGC 47808
Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558
|| ||||| ||||| ||||| || ||||| | | ||| || || | || || |
Sbjct 47809 AATTTGAAAGCCATAGAAACATCTTGCTTCTGTGACTTGTACTTCTTGGCTGAATCTTTC 47868
Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618
| | ||||||||| || || ||||| ||||||||||| ||||| || | | |||
Sbjct 47869 TACAAGGTTTTCATTTACAATTCCATCTGATGCTGCAAAGAATGCAAGTACGTGTGATAT 47928
Query 37619 AAAATGTCTTTCATCATTTGATAATTTTTTCC 37650
||||| ||||||||||||| ||| |||||||
Sbjct 47929 GAAATGCCTTTCATCATTTG-TAAGTTTTTCC 47959
Score = 93.3 bits (102), Expect = 5e-14
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 37212 ATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATT 37271
|||||||| || || || ||||||||||| | |||||||| || | ||| || |||
Sbjct 43916 ATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTCAGCCAGAAAATT 43975
Query 37272 GCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTA 37331
| ||||| || || ||||||||||| || ||||| ||||||||||| | |
Sbjct 43976 GAAGCAAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGCTACCACTCTCTCG 44035
Query 37332 CCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACA 37391
|| | |||| | ||| || | |||||| | | ||||||||| || ||| |||
Sbjct 44036 CCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATCTGCTTTCTTTTTTACA 44095
Query 37392 CATTCAATTGTTTCAATTGCTTTTAAGAGAAAGT 37425
|| ||||||||||| || || || | | |||
Sbjct 44096 CACGGCATTGTTTCAATAGCATTAAATAAATAGT 44129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592133241023680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |