Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq714 136 5e-27 >seq714 Length=734366 Score = 136 bits (150), Expect = 5e-27 Identities = 158/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | ||||| ||||| || |||| ||| |||||||| || |||| |||||| || || Sbjct 47749 ATCTCTAATATATGTATCTATAAGTAGACTGTACATTTCTGAATGAACATTTTCCATTGC 47808 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 || ||||| ||||| ||||| || ||||| | | ||| || || | || || | Sbjct 47809 AATTTGAAAGCCATAGAAACATCTTGCTTCTGTGACTTGTACTTCTTGGCTGAATCTTTC 47868 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | | ||||||||| || || ||||| ||||||||||| ||||| || | | ||| Sbjct 47869 TACAAGGTTTTCATTTACAATTCCATCTGATGCTGCAAAGAATGCAAGTACGTGTGATAT 47928 Query 37619 AAAATGTCTTTCATCATTTGATAATTTTTTCC 37650 ||||| ||||||||||||| ||| ||||||| Sbjct 47929 GAAATGCCTTTCATCATTTG-TAAGTTTTTCC 47959 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 37212 ATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATT 37271 |||||||| || || || ||||||||||| | |||||||| || | ||| || ||| Sbjct 43916 ATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTCAGCCAGAAAATT 43975 Query 37272 GCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTA 37331 | ||||| || || ||||||||||| || ||||| ||||||||||| | | Sbjct 43976 GAAGCAAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGCTACCACTCTCTCG 44035 Query 37332 CCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACA 37391 || | |||| | ||| || | |||||| | | ||||||||| || ||| ||| Sbjct 44036 CCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATCTGCTTTCTTTTTTACA 44095 Query 37392 CATTCAATTGTTTCAATTGCTTTTAAGAGAAAGT 37425 || ||||||||||| || || || | | ||| Sbjct 44096 CACGGCATTGTTTCAATAGCATTAAATAAATAGT 44129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592133241023680