Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_018281.1 Length=43581 Score E Sequences producing significant alignments: (Bits) Value seq12076 84.2 6e-12 >seq12076 Length=43286 Score = 84.2 bits (92), Expect = 6e-12 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 36984 ATCGCACTATCTCAATTAAGTAGAGGC--GTAGAAAGTCGTAGTGATAAACGTCCGATGA 37041 |||||||| |||||||| || | || || || || || | |||||||| |||||| Sbjct 27736 ATCGCACTTTCTCAATT--GTCGCGGGCAGTTGAGAGCCGGACAGATAAACGCCCGATGT 27793 Query 37042 TGTCTGATTTAAGAGAAGCAGGAGGAATTGAGCAAGACGCGAATATGATTTTCTTCTTAT 37101 | || |||||||||||| |||| | || ||||| ||||| |||| || | || | | Sbjct 27794 TATCGGATTTAAGAGAATCAGGGGCGATAGAGCAGGACGCAGATATAGTTATGTTTATTT 27853 Query 37102 ACCGTGATGATTATTACGACCAAGATCAACAAGA 37135 | || ||||| |||||| | ||||| | |||| Sbjct 27854 ATCGCGATGAATATTACAAAAAAGATGAGGAAGA 27887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139296578313872