Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq3213 84.2 9e-12 seq2697 82.4 3e-11 >seq3213 Length=2170589 Score = 84.2 bits (92), Expect = 9e-12 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 8261 TGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGT 8320 |||||| ||| ||||| ||| | || ||| | |||||| | ||| ||||||||||||| Sbjct 302986 TGGAGGAGTGCCAGAGCGGTTGATTGGAGCAGTCTTGAAAACTGTCGTACGTGCGAGCGT 303045 Query 8321 ATCGTGAGTTCGAATCTCACCGCCTCCGCCAGTT 8354 | |||| ||||||||| |||| ||||| ||| || Sbjct 303046 ACCGTGGGTTCGAATCCCACCTCCTCCTCCATTT 303079 >seq2697 Length=66574 Score = 82.4 bits (90), Expect = 3e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 51426 CACGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAGCCGGGCGGCATGCTCGTGTTC 51485 |||||||| ||||||||||| | | ||| ||| ||| |||||| | | | ||| Sbjct 65898 CACGACTATTTCTTCGCCAAAGCGCTGGACAAGGTGCGGCCCGGCGGCGTCATTGCTTTC 65839 Query 51486 GTCACCAGCAAGGGCACGATGGATAAGGCGAGCGACCGGGCACGCAAGTACCTCGCCGAC 51545 |||||| ||| ||| ||||| ||| | |||| | ||| ||| || | || Sbjct 65838 GTCACCTCCAAATTCACCATGGACAAGCAGGACGACACCGTGCGCCGGTATATCTCTGAG 65779 Query 51546 CGCGCCAACCTGATCGGCGCCGTGCGGCTGCCGCAGACCGCGTTCAAAGACAACGCCGGC 51605 |||||| | || || ||||| | || ||||| | || || ||||| | |||||||| Sbjct 65778 CGCGCCGAGCTCATGGGCGCGCTACGCCTGCCCAACACAGCCTTCAAGAAAAACGCCGGT 65719 Query 51606 ACGGAAGTCGTGACCGACGTGCTGTTCCTCCAGAAGCG 51643 || || ||| ||||| | |||||||| | ||||| Sbjct 65718 ACCGAGGTCACCACCGATATCCTGTTCCTGAAAAAGCG 65681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197730569988336