Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq783 154 1e-32
seq2315 136 3e-27
seq242 136 3e-27
seq1551 104 2e-17
seq957 93.3 3e-14
>seq783
Length=580412
Score = 154 bits (170), Expect = 1e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314
|| || || | |||||| |||||||||||||| || ||||| |||| | |||| ||
Sbjct 390115 CGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGTCCA 390056
Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374
|| || | ||||| || ||||| ||||| | |||||| || || ||||||||||| |||
Sbjct 390055 TCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTA 389996
Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434
|| ||||| || ||| ||| |||| | ||||| || | || ||||| |||||||
Sbjct 389995 TCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAACTTCTAGAGTGATG 389936
Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||||| || | ||| || ||||| ||||||||
Sbjct 389935 GTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 389901
Score = 138 bits (152), Expect = 9e-28
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || ||||||||||| || || |||||||| | | ||||| | | || || | ||
Sbjct 390332 ATGGAGTGTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTTCGGCCGTCCTCGAGCTG 390273
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| ||||| | |||||| || || ||||||||||| || || ||||||||
Sbjct 390272 CTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATTTT 390213
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || | || || || | || ||||| | ||| | ||||| |||||
Sbjct 390212 GGCTTTGACATTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTAATAGTTTTCCCGGT 390153
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| |||||||||||| ||||||||
Sbjct 390152 AAGAGTTTTTACAAAAATCTGCAT 390129
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339
|||| || |||||||| || | | ||| || |||| || | ||||| || ||||| |
Sbjct 390546 CTTTCTGAATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGA 390487
Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399
|||| | |||||| || || ||||||||||| || || ||||| || ||| || |||
Sbjct 390486 TCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTT 390427
Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459
| | ||||| || | || ||||| | ||||| ||||| || || | ||||| || |
Sbjct 390426 CGATCGTGTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGA 390367
Query 101460 ATATCTGCAT 101469
| ||||||||
Sbjct 390366 AAATCTGCAT 390357
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339
|||| ||||||||||| || | | ||||| | || |||||||| || || ||||| |
Sbjct 387247 CTTTCTGTATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGA 387188
Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399
| || | |||||| || || ||||| || ||||| |||||||| || || || | |
Sbjct 387187 TTAATCTCTGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCT 387128
Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459
| | || || || | ||| ||||| || |||| ||||| || || | || || || |
Sbjct 387127 CAATGGTATCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGA 387068
Query 101460 ATATCTGCAT 101469
| ||||||||
Sbjct 387067 AAATCTGCAT 387058
>seq2315
Length=138946
Score = 136 bits (150), Expect = 3e-27
Identities = 144/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339
||||||| |||||||| || | | || | |||| ||||| || || |||||||| |
Sbjct 28211 CTTTTTGGATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 28152
Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399
| || ||||| ||||| || || || |||||||| |||||||||||| |||||| |||
Sbjct 28151 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTT 28092
Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459
| | || ||||| | ||| || || || |||| |||||||| || | || || ||||
Sbjct 28091 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTCACAA 28032
Query 101460 ATATCTGCAT 101469
||||||||||
Sbjct 28031 ATATCTGCAT 28022
Score = 125 bits (138), Expect = 6e-24
Identities = 141/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341
||||| |||||||| || | | || | | |||| ||||| || || |||||||| ||
Sbjct 29148 TTTTGAATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATT 29089
Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401
|| ||||| || || || || || |||||||| |||||||| ||| |||||| ||||
Sbjct 29088 AATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 29029
Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAAT 101461
| || ||||| | ||| || || || |||| ||||| || || | || || ||||||
Sbjct 29028 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 28969
Query 101462 ATCTGCATG 101470
|||||||||
Sbjct 28968 ATCTGCATG 28960
Score = 123 bits (136), Expect = 2e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341
||||| |||||||| || | | || | |||| ||||| || || |||||||| ||
Sbjct 27707 TTTTGAATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATT 27648
Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401
|| ||||| ||||| || || || |||||||| |||||||| ||| |||||| ||||
Sbjct 27647 AATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 27588
Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAAT 101461
| || ||||| | ||| || || || |||| ||||| || || | || || ||||||
Sbjct 27587 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 27528
Query 101462 ATCTGCAT 101469
||||||||
Sbjct 27527 ATCTGCAT 27520
Score = 122 bits (134), Expect = 7e-23
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339
||||||| || || || || | | || | |||| |||| || || ||||| || |
Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAA 26908
Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399
|||| | ||| ||||| || ||||| || ||||| |||||||||||| ||||||| | |
Sbjct 26907 TCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCT 26848
Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459
| | || ||||| | |||||| ||||| || | ||||| || || | |||||| ||||
Sbjct 26847 CAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAA 26788
Query 101460 ATATCTGCAT 101469
| ||||||||
Sbjct 26787 AAATCTGCAT 26778
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | ||| ||||| || ||||| ||||| || ||||||||||| |
Sbjct 33219 CCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAA 33160
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | || || || ||||| || | | ||| || || || ||
Sbjct 33159 AGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGG 33100
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || ||||||||||| ||| ||||||| | || | || || || | |||||||
Sbjct 33099 ATTCCCTCCTTATCTTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCACT 33040
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| | || | || || || || || || || ||||| |||||||||
Sbjct 33039 TCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATG 32992
>seq242
Length=1788442
Score = 136 bits (150), Expect = 3e-27
Identities = 144/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339
|||| || ||||| ||||| | || |||| |||| || | ||||| || ||||| |
Sbjct 1569966 CTTTCTGAATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAA 1569907
Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399
|||| | ||||||||| || || |||||||| || ||||| ||||| ||| ||| |||
Sbjct 1569906 TCAATCTCTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTT 1569847
Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459
| | ||| ||||| | ||| || || || || | ||||| || ||||||||||| || |
Sbjct 1569846 CAATAGTATCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGA 1569787
Query 101460 ATATCTGCAT 101469
||||||||||
Sbjct 1569786 ATATCTGCAT 1569777
>seq1551
Length=444118
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || || ||||| | |||||| || |||||||| || |||||||| || |
Sbjct 25341 CCACCTCTCAACCGGAAAACCAGATGAAGTGTGGATTCTTTCTGAATATTGTAGTCTGAC 25400
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| |||| || | ||||| || ||||| ||||| | |||||| || || |||
Sbjct 25401 AATGTTCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGAGGA 25460
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || |||||||| ||| || ||| | ||||| || | || |||
Sbjct 25461 ATGCCTTCCTTGCTCTGAATTTTGGATTTAACGTTTTTAATCGTGTCTGAAGCCTCGACT 25520
Query 101423 TC 101424
||
Sbjct 25521 TC 25522
>seq957
Length=827651
Score = 93.3 bits (102), Expect = 3e-14
Identities = 104/138 (75%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 13630 TTTATTAATGTAACAATCTATATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCG 13689
|||| |||| || | |||||| ||||| | ||| ||||||||| ||||||||| ||
Sbjct 417297 TTTAATAATATAGGCAGCTATATCAAATTTCCTTTTGCAACCTTCATAATTCATGTAACG 417238
Query 13690 TATTTTACCATAGATTGGTCGCTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCA 13749
|| || ||| | || |||||||| ||| | |||| ||| | || |||||||||||
Sbjct 417237 AATCTTCCCAAAAATCGGTCGCTCTGCCCAACCTTGATCATGAATGCCACATATTGACCA 417178
Query 13750 CATGCAACC-GGCATAAC 13766
||| ||||| |||| |||
Sbjct 417177 CATACAACCTGGCAAAAC 417160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396158663490744
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