Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_018846.1
Length=60894
Score E
Sequences producing significant alignments: (Bits) Value
seq95 150 7e-32
seq7013 100 1e-16
>seq95
Length=1800565
Score = 150 bits (166), Expect = 7e-32
Identities = 158/198 (80%), Gaps = 11/198 (6%)
Strand=Plus/Plus
Query 12954 TCCTACTTGATATTTTGATTTACCCCTTTT-GAGAGGGTGACCGGGCGCTCAAAACCGCA 13012
||||| | | |||||||| ||| ||||||| ||||||||| |||| ||||||||||||
Sbjct 66321 TCCTATTAGCTATTTTGAATTAACCCTTTTTGAGAGGGTGGACGGGTGCTCAAAACCGCT 66380
Query 13013 AGTAGTCGGCGGGCATATTCCC-ATTGCT-GGTATTGTATTAGCCGCACGCCCGGTCATA 13070
| ||| |||||||||||||||| |||||| ||||||||||||||| ||| |||| ||||
Sbjct 66381 AATAGACGGCGGGCATATTCCCTATTGCTAGGTATTGTATTAGCCTCACACCCGAACATA 66440
Query 13071 AACCAAGAAGACTGGACACaaaaaaaCCGCATGTCTGTCGGGCGCGGTAACCGCTACTTG 13130
| || | || ||| ||||| ||||||| || ||||| ||||| ||||||| | |
Sbjct 66441 TAAAAATTA-AC--AACAAAAAAATACCGCAT-ACTTTCGGG-GCGGTTACCGCTATTAG 66495
Query 13131 CTAAGGTGTTTTGAGCAC 13148
| |||||||||||||
Sbjct 66496 ---AAGTGTTTTGAGCAC 66510
>seq7013
Length=21900
Score = 100 bits (110), Expect = 1e-16
Identities = 180/263 (68%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 15219 TCGATCTGATAAACAGCCTTCGGGCTGTTCACTGGGCGATCGGGCTTGTCCGGATTGTAG 15278
|| || ||||| ||||| || || || || || || | ||| || || || || || |||
Sbjct 14838 TCAATTTGATATACAGCTTTAGGACTATTAACAGGCCTATCAGGTTTATCAGGGTTATAG 14779
Query 15279 AGGGCTACTCCAGCAGCGCAGAACTGATGCATAGACTGGCGGCGGAATGTCTCACGAGTA 15338
|| | ||| || | ||| || ||||||||||| ||||||||||| || || ||
Sbjct 14778 AGACAAATTCCCGCCTCAATGAATTGGTGCATAGACTGTCGGCGGAATGTTTCTCGTGTG 14719
Query 15339 TTGGGTGCGTAGACCTTGCCGTAGTGCTCCCGAACCCAATTCATGATTGGTGTAATGCCC 15398
|| ||||| || | | |||||||| || ||| |||||||| |||||||| ||
Sbjct 14718 TTAGGTGCATATTCTCTTTGATAGTGCTCACGTGACCAGTTCATGATAGGTGTAATACCT 14659
Query 15399 ACAAGCGGATTTTCCGCGTCGGCCCATGCTTTTCCCGGTGTGAGGTTCAGGAGTGCCAGC 15458
|| || || || || | | |||| ||||| | ||||| | | || | |||
Sbjct 14658 ACTAGTGGGTTACTTGCCTGAGTCCATTCTTTTTCAGGTGTCATATCAAGTAAACAGAGC 14599
Query 15459 AAACACAAAGCAGAACGCTCATT 15481
| ||| | ||||| ||| |||||
Sbjct 14598 AGACAAAGAGCAGTACGTTCATT 14576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194681867805824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |