Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq1690 86.0 9e-12 >seq1690 Length=1574822 Score = 86.0 bits (94), Expect = 9e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 49314 CATCGGGGTGTAGCTCAGTCGGTAGAGCGCTCGGTTCGGGACCGAGAGGCCGTGGGTTCG 49373 || || |||||||| ||| ||||| |||| ||||| ||||||| ||||||||||||||| Sbjct 521482 CAACGAGGTGTAGCGCAGGTGGTAGCGCGCACGGTTAGGGACCGTGAGGCCGTGGGTTCG 521541 Query 49374 AGTCCCGCCACCCAGACCAA 49393 | ||||||||| |||||| Sbjct 521542 AATCCCGCCACTTCGACCAA 521561 Score = 86.0 bits (94), Expect = 9e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 49317 CGGGGTGTAGCTCAGTCGGTAGAGCGCTCGGTTCGGGACCGAGAGGCCGTGGGTTCGAGT 49376 || |||||||| ||| ||||| |||| ||||||||||| |||||||||||||||||| Sbjct 1295679 CGAGGTGTAGCGCAGGTGGTAGCGCGCATGGTTCGGGACCATGAGGCCGTGGGTTCGAGT 1295620 Query 49377 CCCGCCACCCAGACCAA 49393 |||||||| |||||| Sbjct 1295619 CCCGCCACTTCGACCAA 1295603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709501657276160