Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019442.1 Length=60523 Score E Sequences producing significant alignments: (Bits) Value seq95 147 8e-31 seq7013 100 1e-16 >seq95 Length=1800565 Score = 147 bits (162), Expect = 8e-31 Identities = 157/198 (79%), Gaps = 11/198 (6%) Strand=Plus/Plus Query 13455 TCCTACTTGATATTTTGATTTACCCCTTTT-GAGAGGGTGACCGGGCGCTCAAAACCGCA 13513 ||||| | | |||||||| ||| ||||||| ||||||||| |||| |||||||||||| Sbjct 66321 TCCTATTAGCTATTTTGAATTAACCCTTTTTGAGAGGGTGGACGGGTGCTCAAAACCGCT 66380 Query 13514 AGTAGTCGGCGGGCATATTCCC-ATTGCT-GGTATTGTATTAGCCGCACGCCCGGTCATA 13571 | ||| |||||||||||||||| |||||| ||||||||||||||| ||| |||| |||| Sbjct 66381 AATAGACGGCGGGCATATTCCCTATTGCTAGGTATTGTATTAGCCTCACACCCGAACATA 66440 Query 13572 AACCAAGAAGACTGGACACaaaaaaaCCGCATGTCTGTCGGGCGCGGTAACCGCTACTTG 13631 | || | || ||| ||||| ||||||| || ||||| ||||| ||||||| | | Sbjct 66441 TAAAAATTA-AC--AACAAAAAAATACCGCAT-ACTTTCGGG-GCGGTTACCGCTATTAG 66495 Query 13632 CTAAGGCGTTTTGAGCAC 13649 | | ||||||||||| Sbjct 66496 ---AAGTGTTTTGAGCAC 66510 >seq7013 Length=21900 Score = 100 bits (110), Expect = 1e-16 Identities = 180/263 (68%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 15720 TCGATCTGATAAACAGCCTTCGGGCTGTTCACTGGGCGATCGGGCTTGTCCGGATTGTAG 15779 || || ||||| ||||| || || || || || || | ||| || || || || || ||| Sbjct 14838 TCAATTTGATATACAGCTTTAGGACTATTAACAGGCCTATCAGGTTTATCAGGGTTATAG 14779 Query 15780 AGGGCTACTCCAGCAGCGCAGAACTGATGCATAGACTGGCGGCGGAATGTCTCACGAGTA 15839 || | ||| || | ||| || ||||||||||| ||||||||||| || || || Sbjct 14778 AGACAAATTCCCGCCTCAATGAATTGGTGCATAGACTGTCGGCGGAATGTTTCTCGTGTG 14719 Query 15840 TTGGGTGCGTAGACCTTGCCGTAGTGCTCCCGAACCCAATTCATGATTGGTGTAATGCCC 15899 || ||||| || | | |||||||| || ||| |||||||| |||||||| || Sbjct 14718 TTAGGTGCATATTCTCTTTGATAGTGCTCACGTGACCAGTTCATGATAGGTGTAATACCT 14659 Query 15900 ACAAGCGGATTTTCCGCGTCGGCCCATGCTTTTCCCGGTGTGAGGTTCAGGAGTGCCAGC 15959 || || || || || | | |||| ||||| | ||||| | | || | ||| Sbjct 14658 ACTAGTGGGTTACTTGCCTGAGTCCATTCTTTTTCAGGTGTCATATCAAGTAAACAGAGC 14599 Query 15960 AAACACAAAGCAGAACGCTCATT 15982 | ||| | ||||| ||| ||||| Sbjct 14598 AGACAAAGAGCAGTACGTTCATT 14576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193495017323440