Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq2134 86.0 7e-12 seq1604 82.4 8e-11 >seq2134 Length=118285 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/93 (83%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 17912 TGGCGGAATAGGTAGACGCACCAGACTTAAAATCTGTTGAGCATGTGCTCGTGGGAGTTC 17971 ||||||||| ||||||||| |||||| ||||||||||| | |||| | ||||||||| Sbjct 72500 TGGCGGAAT-GGTAGACGCGGCAGACTCAAAATCTGTTGTCCTTGTGA-CTTGGGAGTTC 72557 Query 17972 AAGTCTCCCTACTCCTACTAAA-TAATTAAAAT 18003 |||||||||| | ||||| ||| || |||||| Sbjct 72558 AAGTCTCCCTGCCCCTACCAAAGAAAATAAAAT 72590 >seq1604 Length=351056 Score = 82.4 bits (90), Expect = 8e-11 Identities = 58/65 (89%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 159601 CAGTAGCACAGC-GGATAGTGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCAAATCCT 159659 ||||||| |||| |||||| |||||||||||||||||||| |||| ||||||| |||||| Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348 Query 159660 GCCTG 159664 | ||| Sbjct 255347 GACTG 255343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552913399020480