Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_019443.1
Length=172879
Score E
Sequences producing significant alignments: (Bits) Value
seq2134 86.0 7e-12
seq1604 82.4 8e-11
>seq2134
Length=118285
Score = 86.0 bits (94), Expect = 7e-12
Identities = 77/93 (83%), Gaps = 3/93 (3%)
Strand=Plus/Plus
Query 17912 TGGCGGAATAGGTAGACGCACCAGACTTAAAATCTGTTGAGCATGTGCTCGTGGGAGTTC 17971
||||||||| ||||||||| |||||| ||||||||||| | |||| | |||||||||
Sbjct 72500 TGGCGGAAT-GGTAGACGCGGCAGACTCAAAATCTGTTGTCCTTGTGA-CTTGGGAGTTC 72557
Query 17972 AAGTCTCCCTACTCCTACTAAA-TAATTAAAAT 18003
|||||||||| | ||||| ||| || ||||||
Sbjct 72558 AAGTCTCCCTGCCCCTACCAAAGAAAATAAAAT 72590
>seq1604
Length=351056
Score = 82.4 bits (90), Expect = 8e-11
Identities = 58/65 (89%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 159601 CAGTAGCACAGC-GGATAGTGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCAAATCCT 159659
||||||| |||| |||||| |||||||||||||||||||| |||| ||||||| ||||||
Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348
Query 159660 GCCTG 159664
| |||
Sbjct 255347 GACTG 255343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552913399020480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |