Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_019490.1
Length=49329
Score E
Sequences producing significant alignments: (Bits) Value
seq3436 158 4e-34
>seq3436
Length=2346199
Score = 158 bits (174), Expect = 4e-34
Identities = 318/469 (68%), Gaps = 2/469 (0%)
Strand=Plus/Minus
Query 25199 GAATTGTTCCGACAAGTTCTCTATGTTGTCTAAATAGGTCGTGTGGATATGTAGGACATC 25258
||| ||||| || | || |||||||| || ||||| || || |||||||| || ||||
Sbjct 1123095 GAACTGTTCAGAAAGATTTTCTATGTTATCCAAATATGTTGTATGGATATGAAGCACATT 1123036
Query 25259 GGGGTGGGTGCTTATCTGCACATCTACACCGTCAATCTGTACTATCTTGTGGGTGTTTTC 25318
|| || || |||||| || | | || || || | ||| | ||||| ||||||||
Sbjct 1123035 CGGATGTGTTGATATCTGAACCTGGATTCCATCTATTTCTACAAGTTTGTGTGTGTTTTC 1122976
Query 25319 AATGTATTTTTTATAAATAAAATGGTCGGAGTCGGTAGGGTTGAGTATCAGTATAACTCT 25378
||||||||| ||||| ||||| || | |||||| |||||||| | ||| | || | ||
Sbjct 1122975 AATGTATTTCTTATAGATAAAGTGATTGGAGTCTGTAGGGTTCATTATGATAATGATTCG 1122916
Query 25379 TAACTGTTTATTTTTCTGACGAATGGATAGGATTAACTTTTCGTAATCTTCCTCGCTTTC 25438
||| | ||| || || ||||| || |||| ||| || ||||| || |
Sbjct 1122915 GTTCTGAATCCCTTTTTGCCGGATGGAAAGCATTATCTTATCAAAATCTGTTTCATTCGT 1122856
Query 25439 CCACTCTTCCATTTCATCGCCCACGAAGGTGGTTATCCCTTGTATGGATTTAAGGTTTGC 25498
||| ||||| |||||| | || || || ||||| || || || ||||| | || ||
Sbjct 1122855 CCATTCTTCTGCTTCATCACATACAAATGTTGTTATTCCATGAATAGATTTTAATTTAGC 1122796
Query 25499 CGTTTGGTTTCCTGACGAAGTTTTTATCCCTCTAAATAAAACACTACTTCCTGAAAATTT 25558
||||| || || || || || || || || | || | || || ||| | | |||
Sbjct 1122795 TGTTTGATTACCCGATGATGTCTTGATGCCACGGAACATAATACGGCTTTTAGTCATTTT 1122736
Query 25559 ATTTAGTATTTCATTGTTTGTTACTGTAAAATA-TTCCTGCACGCCCTCTTTTTCTATTT 25617
||| | || || | |||||| | | ||||| || || || || |||||||
Sbjct 1122735 ATTGACTACATCCGTTTTTGTTGTTCTGAAATACTTACT-TGTTCCATCCAAATCTATTT 1122677
Query 25618 TCTCCTCAAACTCTGGAATGATAGAAATACGAGCGGAGGTCATCGTGTA 25666
| ||| | || ||||| ||||| ||| |||||| ||||| || ||
Sbjct 1122676 TTTCCATCATTTCAGGAATAATAGAGATATTAGCGGAAGTCATTGTATA 1122628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157684763146064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |