Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019490.1 Length=49329 Score E Sequences producing significant alignments: (Bits) Value seq3436 158 4e-34 >seq3436 Length=2346199 Score = 158 bits (174), Expect = 4e-34 Identities = 318/469 (68%), Gaps = 2/469 (0%) Strand=Plus/Minus Query 25199 GAATTGTTCCGACAAGTTCTCTATGTTGTCTAAATAGGTCGTGTGGATATGTAGGACATC 25258 ||| ||||| || | || |||||||| || ||||| || || |||||||| || |||| Sbjct 1123095 GAACTGTTCAGAAAGATTTTCTATGTTATCCAAATATGTTGTATGGATATGAAGCACATT 1123036 Query 25259 GGGGTGGGTGCTTATCTGCACATCTACACCGTCAATCTGTACTATCTTGTGGGTGTTTTC 25318 || || || |||||| || | | || || || | ||| | ||||| |||||||| Sbjct 1123035 CGGATGTGTTGATATCTGAACCTGGATTCCATCTATTTCTACAAGTTTGTGTGTGTTTTC 1122976 Query 25319 AATGTATTTTTTATAAATAAAATGGTCGGAGTCGGTAGGGTTGAGTATCAGTATAACTCT 25378 ||||||||| ||||| ||||| || | |||||| |||||||| | ||| | || | || Sbjct 1122975 AATGTATTTCTTATAGATAAAGTGATTGGAGTCTGTAGGGTTCATTATGATAATGATTCG 1122916 Query 25379 TAACTGTTTATTTTTCTGACGAATGGATAGGATTAACTTTTCGTAATCTTCCTCGCTTTC 25438 ||| | ||| || || ||||| || |||| ||| || ||||| || | Sbjct 1122915 GTTCTGAATCCCTTTTTGCCGGATGGAAAGCATTATCTTATCAAAATCTGTTTCATTCGT 1122856 Query 25439 CCACTCTTCCATTTCATCGCCCACGAAGGTGGTTATCCCTTGTATGGATTTAAGGTTTGC 25498 ||| ||||| |||||| | || || || ||||| || || || ||||| | || || Sbjct 1122855 CCATTCTTCTGCTTCATCACATACAAATGTTGTTATTCCATGAATAGATTTTAATTTAGC 1122796 Query 25499 CGTTTGGTTTCCTGACGAAGTTTTTATCCCTCTAAATAAAACACTACTTCCTGAAAATTT 25558 ||||| || || || || || || || || | || | || || ||| | | ||| Sbjct 1122795 TGTTTGATTACCCGATGATGTCTTGATGCCACGGAACATAATACGGCTTTTAGTCATTTT 1122736 Query 25559 ATTTAGTATTTCATTGTTTGTTACTGTAAAATA-TTCCTGCACGCCCTCTTTTTCTATTT 25617 ||| | || || | |||||| | | ||||| || || || || ||||||| Sbjct 1122735 ATTGACTACATCCGTTTTTGTTGTTCTGAAATACTTACT-TGTTCCATCCAAATCTATTT 1122677 Query 25618 TCTCCTCAAACTCTGGAATGATAGAAATACGAGCGGAGGTCATCGTGTA 25666 | ||| | || ||||| ||||| ||| |||||| ||||| || || Sbjct 1122676 TTTCCATCATTTCAGGAATAATAGAGATATTAGCGGAAGTCATTGTATA 1122628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157684763146064