Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq179 100 3e-16 seq1094 96.9 4e-15 seq875 95.1 1e-14 seq3436 89.7 6e-13 seq1070 84.2 3e-11 seq1752 82.4 9e-11 seq1604 82.4 9e-11 >seq179 Length=2312354 Score = 100 bits (110), Expect = 3e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527 ||||||||| ||||||||||||| || |||| || ||||||| || ||||||||||| | Sbjct 479353 GTCGGGGTGGCAGGATTCGAACCTGCGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 479412 Query 167528 ACTGCGCTACACCCCGAA 167545 |||||||||||||||||| Sbjct 479413 ACTGCGCTACACCCCGAA 479430 >seq1094 Length=2708314 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 167464 AATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAA 167523 ||| |||||||| ||||||||||||| | |||| || ||||||| || ||||||||| Sbjct 981873 AATTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAA 981932 Query 167524 CCAGACTGCGCTACACCCCGAAA 167546 || |||||||||||||||||||| Sbjct 981933 CCGGACTGCGCTACACCCCGAAA 981955 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 167464 AATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAA 167523 ||| |||||||| ||||||||||||| | |||| || ||||||| || ||||||||| Sbjct 981979 AATTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAA 982038 Query 167524 CCAGACTGCGCTACACCCCGAAAATTATAA 167553 || ||||||||||||||||| | |||||| Sbjct 982039 CCGGACTGCGCTACACCCCGTTATTTATAA 982068 >seq875 Length=1099013 Score = 95.1 bits (104), Expect = 1e-14 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527 |||||||| ||||||||||||| | |||| || ||||||| || ||||||||||| | Sbjct 1090760 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 1090819 Query 167528 ACTGCGCTACACCCCGAA-AATTATAA 167553 |||||||||||||||||| ||||| || Sbjct 1090820 ACTGCGCTACACCCCGAATAATTACAA 1090846 >seq3436 Length=2346199 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527 |||||||| ||||||||||||| | |||| || ||||||| || ||||||||||| | Sbjct 2131320 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 2131379 Query 167528 ACTGCGCTACACCCCGA 167544 ||||||||||||||||| Sbjct 2131380 ACTGCGCTACACCCCGA 2131396 >seq1070 Length=478823 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527 ||||||||||||||||||||||||||| || | ||||| ||| | ||||||||| | Sbjct 146331 GTCGGGGTGAAAGGATTCGAACCTTCGACCTCCACGTCCCGAACGTGGCGCGCTAACCGG 146272 Query 167528 ACTGCGCTACACCCCG 167543 ||||||||||||||| Sbjct 146271 GCTGCGCTACACCCCG 146256 >seq1752 Length=186427 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527 ||||||||| ||||||||||||| || || | || ||||||| || | ||| ||||| | Sbjct 14748 GTCGGGGTGGCAGGATTCGAACCTGCGACCTCCTGCTCCCAAAGCAGGCGCGATAACCGG 14807 Query 167528 ACTGCGCTACACCCCGAA 167545 ||| |||||||||||||| Sbjct 14808 ACTACGCTACACCCCGAA 14825 >seq1604 Length=351056 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527 ||||||||| ||||||||||||| || || | ||||||||||||| | ||| | ||| | Sbjct 255496 GTCGGGGTGGCAGGATTCGAACCTGCGACCTCCTGGTCCCAAACCAGGCGCGATGACCGG 255555 Query 167528 ACTGCGCTACACCCCGAA 167545 || |||||||||||||| Sbjct 255556 GCTACGCTACACCCCGAA 255573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584756327837760