Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_019507.1
Length=182833
Score E
Sequences producing significant alignments: (Bits) Value
seq179 100 3e-16
seq1094 96.9 4e-15
seq875 95.1 1e-14
seq3436 89.7 6e-13
seq1070 84.2 3e-11
seq1752 82.4 9e-11
seq1604 82.4 9e-11
>seq179
Length=2312354
Score = 100 bits (110), Expect = 3e-16
Identities = 69/78 (88%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527
||||||||| ||||||||||||| || |||| || ||||||| || ||||||||||| |
Sbjct 479353 GTCGGGGTGGCAGGATTCGAACCTGCGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 479412
Query 167528 ACTGCGCTACACCCCGAA 167545
||||||||||||||||||
Sbjct 479413 ACTGCGCTACACCCCGAA 479430
>seq1094
Length=2708314
Score = 96.9 bits (106), Expect = 4e-15
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 167464 AATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAA 167523
||| |||||||| ||||||||||||| | |||| || ||||||| || |||||||||
Sbjct 981873 AATTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAA 981932
Query 167524 CCAGACTGCGCTACACCCCGAAA 167546
|| ||||||||||||||||||||
Sbjct 981933 CCGGACTGCGCTACACCCCGAAA 981955
Score = 95.1 bits (104), Expect = 1e-14
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 167464 AATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAA 167523
||| |||||||| ||||||||||||| | |||| || ||||||| || |||||||||
Sbjct 981979 AATTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAA 982038
Query 167524 CCAGACTGCGCTACACCCCGAAAATTATAA 167553
|| ||||||||||||||||| | ||||||
Sbjct 982039 CCGGACTGCGCTACACCCCGTTATTTATAA 982068
>seq875
Length=1099013
Score = 95.1 bits (104), Expect = 1e-14
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527
|||||||| ||||||||||||| | |||| || ||||||| || ||||||||||| |
Sbjct 1090760 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 1090819
Query 167528 ACTGCGCTACACCCCGAA-AATTATAA 167553
|||||||||||||||||| ||||| ||
Sbjct 1090820 ACTGCGCTACACCCCGAATAATTACAA 1090846
>seq3436
Length=2346199
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527
|||||||| ||||||||||||| | |||| || ||||||| || ||||||||||| |
Sbjct 2131320 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 2131379
Query 167528 ACTGCGCTACACCCCGA 167544
|||||||||||||||||
Sbjct 2131380 ACTGCGCTACACCCCGA 2131396
>seq1070
Length=478823
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527
||||||||||||||||||||||||||| || | ||||| ||| | ||||||||| |
Sbjct 146331 GTCGGGGTGAAAGGATTCGAACCTTCGACCTCCACGTCCCGAACGTGGCGCGCTAACCGG 146272
Query 167528 ACTGCGCTACACCCCG 167543
|||||||||||||||
Sbjct 146271 GCTGCGCTACACCCCG 146256
>seq1752
Length=186427
Score = 82.4 bits (90), Expect = 9e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527
||||||||| ||||||||||||| || || | || ||||||| || | ||| ||||| |
Sbjct 14748 GTCGGGGTGGCAGGATTCGAACCTGCGACCTCCTGCTCCCAAAGCAGGCGCGATAACCGG 14807
Query 167528 ACTGCGCTACACCCCGAA 167545
||| ||||||||||||||
Sbjct 14808 ACTACGCTACACCCCGAA 14825
>seq1604
Length=351056
Score = 82.4 bits (90), Expect = 9e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 167468 GTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAG 167527
||||||||| ||||||||||||| || || | ||||||||||||| | ||| | ||| |
Sbjct 255496 GTCGGGGTGGCAGGATTCGAACCTGCGACCTCCTGGTCCCAAACCAGGCGCGATGACCGG 255555
Query 167528 ACTGCGCTACACCCCGAA 167545
|| ||||||||||||||
Sbjct 255556 GCTACGCTACACCCCGAA 255573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 584756327837760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |