Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019513.1 Length=45552 Score E Sequences producing significant alignments: (Bits) Value seq14302 98.7 3e-16 >seq14302 Length=8876 Score = 98.7 bits (108), Expect = 3e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 3533 TCTCTTAAGAAATCAACTTTATTAGTTGTACCAATGAAAATACATTGCCTTGGAAAATCT 3592 |||||||| ||||| | | ||||||||| || | ||| | || ||| || || | | Sbjct 8484 TCTCTTAAAAAATCTTCCTCATTAGTTGTTCCGAAGAAGACGCAACGCCGGGGGAAGTGT 8543 Query 3593 TCAATATAATGTCCATAAGCAACACGAAACCGGTCAACTTGTTTAGATATGAAATGCTTA 3652 || | | | || ||||| || | ||| ||||| ||| |||| || ||| |||||| Sbjct 8544 TCTACACGTTTGCCGTAAGCCACTCTAAAACGGTCTTCTTTTTTACTTACGAAGTGCTTA 8603 Query 3653 ATAGCTTCAACTTCAGCTTTTCTTGTAGCTGCAAGTTCTGCCATTTCCATTAGCCAAACG 3712 | || || ||||||||||| | | | ||||||||| | | || || |||||| Sbjct 8604 ACTGCGTCTACTTCAGCTTTACGTAACCCGGCAAGTTCTCCTAACTCAATAAGCCAAGAC 8663 Query 3713 CCTTGTAAGGCCTCATAGGCTTCTTTACCTGTAA 3746 ||||||| | || ||||||||||||| |||| Sbjct 8664 CCTTGTATGCTTTCTAAGGCTTCTTTACCCGTAA 8697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145601921442656