Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_019515.1
Length=93839
Score E
Sequences producing significant alignments: (Bits) Value
seq1599 102 5e-17
seq1948 84.2 1e-11
>seq1599
Length=3738065
Score = 102 bits (112), Expect = 5e-17
Identities = 183/267 (69%), Gaps = 3/267 (1%)
Strand=Plus/Minus
Query 78354 ACTTGCGGTATATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCT 78413
|| ||| ||||||||| || | |||||| ||||| | ||| || | ||| || ||
Sbjct 2426686 ACCTGCTCTATATGATTACAATACACATGAGCATCACCTAATGTATGTACGAAATCACCA 2426627
Query 78414 ACTTCCAGTCCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTA 78473
| |||| || | ||||| || || ||| | ||||| || |||||||||||
Sbjct 2426626 GCCTCCAAACCAGTAACCTGCGCCATCATCTGTAATAACAATGCATAAGAAGCAATGTTG 2426567
Query 78474 AATGGAATTCCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCA 78533
|| || | || || || | ||| |||||||||| || | || |||||| | |||
Sbjct 2426566 AACGGCACACCCAAAAAAATATCAGCGCTTCGTTGATATAGCTGCAAACTTAACCGGCCA 2426507
Query 78534 TCAACTGATACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAG 78593
||| | |||||||||||||| | ||| ||||| ||||| | ||| | || | |
Sbjct 2426506 TCA---GCCACGTAAAACTGGAAAAAAGTATGACATGGCGGCAAATTCATGTTTTCCAGG 2426450
Query 78594 TCAGCAGGATTCCAAGCAGACACAATA 78620
||| || |||||| ||| |||||||
Sbjct 2426449 TCACCAACATTCCAGGCACTCACAATA 2426423
>seq1948
Length=475166
Score = 84.2 bits (92), Expect = 1e-11
Identities = 161/237 (68%), Gaps = 3/237 (1%)
Strand=Plus/Minus
Query 78375 TAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGTCCGCACAAATGC 78434
||||| || || || || | ||| |||| ||||||||| ||| | ||| | ||
Sbjct 215830 TAAATGTGTGCATCTCCTAGTGTATGAACGAAGTCTCCGGCTTTTAAACCGGTAACCTGA 215771
Query 78435 GCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTCCTAAGAATACG 78494
|| || || ||| |||||| || ||||| || ||||||||||| | ||| | ||||
Sbjct 215770 GCCATCATTTGTAAAAGTAAAGCATATGACGCTATGTTAAATGGCACTCCCAGAAATATA 215711
Query 78495 TCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGATACGTAAAACTGG 78554
||| | || ||||| || ||||| | |||| ||||| || || || || |||
Sbjct 215710 TCAGCACTGCGTTGATATAATTGTAAGCTTAATCGTCCAT---TTGCCACATAGAATTGG 215654
Query 78555 AATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGGATTCCAAGCA 78611
|| | || ||||| || |||| ||| | || | |||| | ||||||||||
Sbjct 215653 AAAAAAGCATGACATGGAGGTAAATTCATGTTTTCCAGGTCACCCACATTCCAAGCA 215597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300069305905600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |