Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_019517.1
Length=136947
Score E
Sequences producing significant alignments: (Bits) Value
seq2134 105 6e-18
>seq2134
Length=118285
Score = 105 bits (116), Expect = 6e-18
Identities = 184/266 (69%), Gaps = 4/266 (2%)
Strand=Plus/Minus
Query 133549 ACGACCAAAAATCTCGTCCATCAAAACTTTTAAATAAGCCATTTCGCAGTCATC--TAAG 133606
||| ||||||||||| |||||||| | ||||| ||| || ||| |||||| ||
Sbjct 8155 ACGCCCAAAAATCTCATCCATCAACATTTTTAGATATGCTTGTTCATTGTCATCAATACT 8096
Query 133607 TGAACAAATATTACTCCATCATCGCTTAGCAGATTACGAATTATTTCTAACCTGTCCCGC 133666
| |||||| || |||||||| || ||||| || | ||||| || || || |||
Sbjct 8095 TATCCAAATACTA--CCATCATCTGCTAAAAGATTTCGTAAAATTTCCAATCTATCACGC 8038
Query 133667 ATTAAGCCCAGCCAAATGGAGTGCTCCAGGCTATCATCGTAGTGCTCAAAATCCCTTCCG 133726
||||| ||||||||| ||| || | || ||||| || ||| | ||
Sbjct 8037 ATTAAAGAAAGCCAAATGCTGTGTTCATATCCGTCGTCGTATTGAGGAAACGCAGAGCCA 7978
Query 133727 GTATTGAATGGCGGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTGCTCTAGT 133786
||||| | |||||||| ||||| | ||| ||||||| ||| ||| |||| | || ||
Sbjct 7977 GTATTATACGGCGGGTCGATGTAGATACATTTCACTTGGCCGGCAAACTCGTCTTCGAGG 7918
Query 133787 GCCTTCAATGCCAGTAAGTTATCGCC 133812
| || | || |||| |||||||||
Sbjct 7917 GATTTTAGGGCAAGTAGGTTATCGCC 7892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 437966632066240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |