Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019517.1 Length=136947 Score E Sequences producing significant alignments: (Bits) Value seq2134 105 6e-18 >seq2134 Length=118285 Score = 105 bits (116), Expect = 6e-18 Identities = 184/266 (69%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 133549 ACGACCAAAAATCTCGTCCATCAAAACTTTTAAATAAGCCATTTCGCAGTCATC--TAAG 133606 ||| ||||||||||| |||||||| | ||||| ||| || ||| |||||| || Sbjct 8155 ACGCCCAAAAATCTCATCCATCAACATTTTTAGATATGCTTGTTCATTGTCATCAATACT 8096 Query 133607 TGAACAAATATTACTCCATCATCGCTTAGCAGATTACGAATTATTTCTAACCTGTCCCGC 133666 | |||||| || |||||||| || ||||| || | ||||| || || || ||| Sbjct 8095 TATCCAAATACTA--CCATCATCTGCTAAAAGATTTCGTAAAATTTCCAATCTATCACGC 8038 Query 133667 ATTAAGCCCAGCCAAATGGAGTGCTCCAGGCTATCATCGTAGTGCTCAAAATCCCTTCCG 133726 ||||| ||||||||| ||| || | || ||||| || ||| | || Sbjct 8037 ATTAAAGAAAGCCAAATGCTGTGTTCATATCCGTCGTCGTATTGAGGAAACGCAGAGCCA 7978 Query 133727 GTATTGAATGGCGGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTGCTCTAGT 133786 ||||| | |||||||| ||||| | ||| ||||||| ||| ||| |||| | || || Sbjct 7977 GTATTATACGGCGGGTCGATGTAGATACATTTCACTTGGCCGGCAAACTCGTCTTCGAGG 7918 Query 133787 GCCTTCAATGCCAGTAAGTTATCGCC 133812 | || | || |||| ||||||||| Sbjct 7917 GATTTTAGGGCAAGTAGGTTATCGCC 7892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437966632066240