Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq179 197 2e-45 seq19236 136 6e-27 seq385 134 2e-26 seq95 116 5e-21 seq2441 102 1e-16 seq6610 95.1 2e-14 seq2249 95.1 2e-14 seq3213 84.2 3e-11 >seq179 Length=2312354 Score = 197 bits (218), Expect = 2e-45 Identities = 457/681 (67%), Gaps = 12/681 (2%) Strand=Plus/Minus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGTGTT 139498 |||||||| |||||||| || || | || ||| | | ||||| |||| || ||| || Sbjct 131959 AAAGGAATAATTTTAGCCGGAGGAGCAGGAACCAGACTTCATCCGATGACAATAAGTATT 131900 Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTT 139558 || || ||| || | || ||||| |||||||| ||||| || ||||| | |||||||| Sbjct 131899 TCCAAGCAGATAATTCCGGTATATGATAAACCTATGATATATTATCCGCTTTCAACTCTT 131840 Query 139559 ATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATAGAAATTCTTTC 139618 || || || ||||| ||| | | ||||||| |||| |||||||| | || | Sbjct 131839 ATGCTTGCCGGGATAAAAGAAGTTTTGGTAATATCCACACAACAGGATATAGGTTTATAT 131780 Query 139619 GAGAACTTACT--AGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTTCAAG 139676 || | |||| ||| | |||||||| || || | | ||||||||| ||||| Sbjct 131779 GAAAGACTACTTAAGG--ATGGTTCACAGTTAGGAATGAAAATAGAATATAAAGTTCAGC 131722 Query 139677 AAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATCTA 139736 ||| | || | ||||| ||||| | | || |||||||| ||||| | || Sbjct 131721 CGTCTCCTGACGGACTTGCACAGGCTTTTATACTTGGAGAAGAATTTATAGGAGAGGATA 131662 Query 139737 AAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCTTCTAATATAGATAGATTACTTA 139796 | ||| | | || ||||| || || ||||| ||| | | | | | || | Sbjct 131661 ATGTATGTTTAATATTAGGGGATAATATTTTTTATGGTCAGGGTTTTGGAAATATATTGT 131602 Query 139797 TGGAA---GCTAATATGTCTGATAAAAATACGATATTTGCATATCGTGTAAATGATCCTC 139853 ||||| ||| | ||| ||| || ||| |||| ||| ||| | |||||||| Sbjct 131601 TGGAATCGGCTGACATGAAAGATGGTGCTATGATTTTTGGTTATTATGTGACTGATCCTC 131542 Query 139854 AGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGAAAAAC 139913 | |||||||| || | ||||| || || | | || | |||| || |||||||||| Sbjct 131541 AAAGATATGGGGTTGCAGAATTTAATAAAGAAGGGAAAGTGATTTCAATAGAAGAAAAAC 131482 Query 139914 CTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGATGTTA 139973 || || |||||||||||||| || || |||| ||||||| |||| ||| ||||| | Sbjct 131481 CTGAAAAACCTAAATCTAATTATGCTGTTACAGGGCTATATTTTTATAGTAATGATGTGA 131422 Query 139974 TCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGATATTA 140033 | ||| ||| || | | | || |||||| | ||||| |||||| | ||| ||| Sbjct 131421 TAGAAAAAGCAAAAAATCTGAAGCCTTCAAAAAGGGGAGAGCTTGAAATAACTGATCTTA 131362 Query 140034 A-CGCATATTACTTAGATAAGAATCAATTATCAGTTAAAGCTTTTGACAGAAGTGGTACT 140092 | || || || | | || || |||| || ||||| | || |||| ||| | Sbjct 131361 ATAATATGTTCCTGAAAGAA-AACAGATTA-CATATAAAGTTATT--AGGAAGAGGTTTT 131306 Query 140093 ACATGGTTAGATACTGGTACT 140113 ||||||||||||| || ||| Sbjct 131305 GCATGGTTAGATACAGGCACT 131285 >seq19236 Length=217251 Score = 136 bits (150), Expect = 6e-27 Identities = 230/333 (69%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 67556 ATTGACTTCGACGGTACATGTGTAACACATGATTTTCCAAACGTCGGTAAAGATATTGGA 67615 ||||| || || || |||||||| || ||||| |||||||| | || ||||||||||| Sbjct 31575 ATTGATTTTGATGGAACATGTGTTACGCATGAATTTCCAAAAATTGGGAAAGATATTGGT 31634 Query 67616 GCTAAAAGAGTTCTTAAGAAATTAGTTGACAATGGACACAGATTGATACTGTTTACTATG 67675 || | || ||||| ||||| |||||||| |||||| | || || || |||||| Sbjct 31635 GCGGTACCTGTCCTTAAAGCGTTAGTAGACAATGGTCACAGACTAATCCTTTTCACTATG 31694 Query 67676 CGTTCAGATGTTGAAAATCCTACATCAGAAGATACTAATATTCTTTGTAAAGGTGGAAAT 67735 | ||| | || ||||| ||| |||||| | || | | || || | | Sbjct 31695 AGGAGTGATATAGAGAATCCACAATCGGAAGATTACGACATCCATCCGGTTGGAGGTACT 31754 Query 67736 TATCTAACTGATGCTGTAAATTGGTTTAAAGAAAATGATATACCTCTTTACGGAATCAAT 67795 ||| |||| |||||||| | ||||||||| | || ||||| || ||||| ||||| || Sbjct 31755 TATTTAACCGATGCTGTTGAATGGTTTAAACAGAACGATATTCCACTTTATGGAATAAAC 31814 Query 67796 ACTAATCCTACTCAGAAATCTTGGACTCATTCTCCTAAAGCTTACGGTCAATTAATAATC 67855 | |||||| || | ||||| ||||| || || || || |||| || || Sbjct 31815 AAGAATCCTGACCAACATAAGTGGACGCATTCGCCAAAGGCCTATTGTCAGCTATACATT 31874 Query 67856 GACGATATTGGATTAGGTATTCCTTTAGTTTAT 67888 || ||| || ||||||||||| ||| || || Sbjct 31875 GATGATGCTGCTTTAGGTATTCCATTAATTCAT 31907 >seq385 Length=1145925 Score = 134 bits (148), Expect = 2e-26 Identities = 391/595 (66%), Gaps = 9/595 (2%) Strand=Plus/Plus Query 139425 TTACAAGAAAT-AGAAAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCA 139483 ||| ||| ||| | ||||| || |||||||| || || || || || | || ||||| Sbjct 953462 TTATAAGTAATTATGAAAGGTATAATTTTAGCGGGAGGATCGGGAACAAGATTATATCCA 953521 Query 139484 TTGACTATCAGTGTTTCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTAT 139543 ||||| || ||| ||||| ||| | || || || ||||| || |||||||| | | Sbjct 953522 TTGACAATTGCTGTAAGTAAACAATTAATGCCGGTTTATGATAAGCCGATGATTTATTTT 953581 Query 139544 CCATTGACAACTCTTATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAG 139603 |||||| |||| | || || || || || |||||| | || || | || || | Sbjct 953582 CCATTGTCAACATTGATGTTGGCAGGAATTAAAGAAATATTAATTATTACTACTCCTGAA 953641 Query 139604 GATAGAAATTCTTTCGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAA 139663 ||| | |||||| | || ||| | ||||| ||| | ||||||| | || | Sbjct 953642 GATTGTTCTTCTTTTCAAAAATTATTGGGTAATGGTG-ATAATTTGGGAATTTCATTGTC 953700 Query 139664 T-ACGCTGTTCAAGAAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATT 139722 | | || | || ||| || | || ||||| || ||||| |||| || ||||| || Sbjct 953701 TTATGCGTTGCAGCCAAATCCGGAAGGATTAGCTCAGGCTTTTATTATTGGAGAAGATTT 953760 Query 139723 CATAGGTAAATCTAAAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCTTCTAATAT 139782 ||| || ||| | |||| || | ||| ||||||| || || || | | | | | Sbjct 953761 CATTGGAAAAGATGAAGTTGCATTAATTCTAGGTGATAATATATTTTACGGAGCAGGTTT 953820 Query 139783 AGATAGATTACTTATGGA-AGCTAATATGTCTGATAAAAA--TACGATATTTGCATATCG 139839 | ||| || | || || || | || | || | | || ||||| |||| Sbjct 953821 GG---GATCTTTTTTAGAGAGTAAAAAAAACTTAAAAGGAGCTTGTATTTTTGCTTATCA 953877 Query 139840 TGTAAATGATCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTC 139899 ||| ||||| | | ||||| || || ||||||||| | || ||| | | || Sbjct 953878 GGTATCAGATCCGGAACGTTATGGAGTTGTAGAATTCGATCAGGATAATAGAATTATATC 953937 Query 139900 GATCGAAGAAAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTA 139959 ||| ||||||||||| ||| || ||||| ||||| || |||| || ||||||| || Sbjct 953938 GATAGAAGAAAAACCGAAGAAACCAAAATCGAATTATGCCATACCGGGACTATATTTTTA 953997 Query 139960 TAATAACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAA 140014 | |||| | || || ||||| | | | |||||||| |||||||||||| Sbjct 953998 TGATAATAAAGTAGTCTCCTATGCTAAAAATCTGAAACCTTCTGCTCGTGGAGAA 954052 >seq95 Length=1800565 Score = 116 bits (128), Expect = 5e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 139436 AGAAAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGT 139495 |||||||| ||||||||||||||||| ||||| || | || ||||| | || | || Sbjct 1425083 AGAAAAGGTATTATTTTAGCAGGTGGTTCTGGAACTAGATTACATCCTATAACCTTAGGT 1425024 Query 139496 GTTTCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACT 139555 ||||| ||||| || || ||||| || ||||||||||||||||| || ||||| |||| Sbjct 1425023 GTTTCTAAACAATTGTTGCCTGTTTATGATAAACCAATGATTTATTACCCATTAGCAACC 1424964 Query 139556 CTTATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACC 139599 || || ||| ||||| | || || | || || || ||||| Sbjct 1424963 CTGATGCTAGCGGGTATTAGAGATATTTTAATTATCTCCACACC 1424920 >seq2441 Length=2995558 Score = 102 bits (112), Expect = 1e-16 Identities = 221/322 (69%), Gaps = 9/322 (3%) Strand=Plus/Minus Query 139815 ATAAAAATACGATATTTGCATATCGTGTAAATGATCCTCAGAGATATGGTGTAGTTGAAT 139874 ||||| ||| |||||| ||| | || | ||||| | ||||||||||||| |||| Sbjct 457261 ATAAAGCTACTGTATTTGGTTATTGGGTCAGCGATCCGGAAAGATATGGTGTAGCCGAAT 457202 Query 139875 TCGATGAATATGATAACGCTGTTTCGATCGAAGAAAAACCTTTGAATCCTAAATCTAATT 139934 | ||| || ||| ||| | | | || || |||||||| |||||||||| |||| Sbjct 457201 TTGATAAAGATGGTAATGTTCTCAGTATTGAGGAAAAACCGGAATATCCTAAATCGAATT 457142 Query 139935 ACGCAGTACCAGGCTTATATTTCTATAATAA-CGATGTTATCGAAGTAGCTAAGACTATC 139993 | |||||| |||| | ||||| ||| ||| ||| ||||| | |||| || | || Sbjct 457141 ATGCAGTAACAGGACTTTATTTTTATCCTAATCGA-GTTATTAATATAGCGAAAAACATA 457083 Query 139994 AAACCTTCAGCTCGTGGAGAATACGAAATATCAGATATTAACGCA-TATTACTTAGATAA 140052 | ||||| |||||||||||| || ||| | | | ||| || | | |||| | | Sbjct 457082 CAGCCTTCTGCTCGTGGAGAACTTGAGATAAC-TACAGTAAATCAGCAATTCTTAAAAGA 457024 Query 140053 GAATCAATTATCAGTTAAAGCT-TTTGACAGAAGTGGTACTACATGGTTAGATACTGGTA 140111 |||| | || || || || | |||| | || ||| | ||||||||||||| || | Sbjct 457023 GAATGATTTGAAAG-TACAGATCTTTG---GTAGAGGTTTTGCATGGTTAGATACAGGAA 456968 Query 140112 CTATTCAGTCTTTAGCTGAAGC 140133 || | | ||| | ||||||| Sbjct 456967 CTCATGATTCTCTTTCTGAAGC 456946 >seq6610 Length=10425 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/160 (75%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 139847 GATCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCG-ATCGA 139905 || |||||| | |||||||| || || |||||||| | |||| | || | | || || Sbjct 7606 GACCCTCAGCGCTATGGTGTCGTAGATTTCGATGACCGTCATAATG-TGCTCAGTATAGA 7664 Query 139906 AGAAAAACCTTTGAATCCTAAATCTAATTACGCAGT-ACCAGGCTTATATTTCTATAATA 139964 ||||||||| | |||||||||||||| || || ||| ||||| ||||||||| || Sbjct 7665 AGAAAAACCGTCTTCACCTAAATCTAATTATGCTGTAACCGGGCTT-TATTTCTATCCTA 7723 Query 139965 ACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGC 140004 | || ||||| || |||| ||| ||| |||||||| || Sbjct 7724 ATGAAGTTATTGAGATAGCCAAGCATATAAAACCTTCTGC 7763 >seq2249 Length=266201 Score = 95.1 bits (104), Expect = 2e-14 Identities = 133/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 139840 TGTAAATGATCCTCAGAG-ATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTT 139898 |||||| || || |||| |||||| || |||||||| |||||| | |||| | ||| Sbjct 209667 TGTAAAAGACCCG-AGAGCATATGGGGTTGTTGAATTTGATGAAAACAATAAAGTAATTT 209609 Query 139899 CGATCGAAGAAAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCT 139958 || | |||||||||||| ||| || ||||| || || || ||||| || | ||||||| Sbjct 209608 CGTTGGAAGAAAAACCTCAGAAGCCAAAATCGAACTATGCTGTACCCGGACTTTATTTCT 209549 Query 139959 ATAATAACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACG 140018 || | || ||| ||| ||| || | | |||||||| |||| || ||||||| Sbjct 209548 ATGACAAGACCGTTGCCGAGAAAGCAAAAGCCCTGAAACCTTCGCCTCGGGGCGAATACG 209489 Query 140019 AAAT 140022 | || Sbjct 209488 AGAT 209485 >seq3213 Length=2170589 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/188 (70%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 139827 TATTTGCATATCGTGTAAATGATCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATG 139886 |||||| || | || || ||||| || || | |||||| |||||||| || |||| | Sbjct 446945 TATTTGGCTACCAGGTGAAAGATCCGCAAAGGTTTGGTGTTGTTGAATTTGACAAATACG 447004 Query 139887 ATAACGCTGTTTCGATCGAAGAAAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAG 139946 | | || || |||||||||||| ||||| ||||||||||| || || | | Sbjct 447005 GTGTAGTCAAATCTATTGAAGAAAAACCTAAAAATCCAAAATCTAATTATGCTATAACGG 447064 Query 139947 GCTTATATTTCTATAATAACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTC--AGC 140004 | || ||||||||| | ||| | || | ||| || || ||| | |||||||| ||| Sbjct 447065 GATTGTATTTCTATGACAACAAAGTAGTAGAATATGCAAAAACTTTGAAACCTTCTAAGC 447124 Query 140005 TCGTGGAG 140012 || |||| Sbjct 447125 GCGGGGAG 447132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701644892842240