Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq95 87.8 1e-12 seq1991 82.4 5e-11 >seq95 Length=1800565 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 45236 GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGAA 45295 |||||| |||||||| |||||||||||| ||||||||| ||||||| ||||||||| Sbjct 1258619 GCGCCCGTAGCTCAGTTGGATAGAGCACCCGCCTTCTAAGCGGGTGGTCGCAGGTTCGAA 1258678 Query 45296 TCCTACAGGGCGTGCCAT 45313 |||| | ||||| ||||| Sbjct 1258679 TCCTGCCGGGCGCGCCAT 1258696 >seq1991 Length=147557 Score = 82.4 bits (90), Expect = 5e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 38215 TCGGGGAATTAGCTCAGTTGGG-AGAGCAGGGTCTTTGCAAGGCTCAGGTCATCGGTTCG 38273 ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| Sbjct 145189 TCGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCG 145130 Query 38274 AGTCCGATATTCTCCAC 38290 | ||||||||||||||| Sbjct 145129 ACTCCGATATTCTCCAC 145113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356586623895304