Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_019541.1
Length=45364
Score E
Sequences producing significant alignments: (Bits) Value
seq95 266 9e-67
>seq95
Length=1800565
Score = 266 bits (294), Expect = 9e-67
Identities = 562/832 (68%), Gaps = 15/832 (2%)
Strand=Plus/Plus
Query 18008 ATGACTACGACAGTTAATTCAGACATGATCATCTACAACCAACTGGCTCAAACAGCCTAT 18067
||| | || || |||||| |||| ||| | || || || | || || ||||| || ||
Sbjct 415774 ATGGCAACTACCGTTAATACAGATATGGTTATTTATAATGACCTAGCACAAACCGCTTAC 415833
Query 18068 TTAGAACGATTACAAGACAAT-TTGAATGTTTTTAATGAAGCTTCCAATGGTGCGATTAT 18126
| ||||| | |||||| ||||| | ||||| | | || ||||| || || ||
Sbjct 415834 CTTGAACGTATTCAAGACGTGATTGAAA-TCTTTAACGTTTCATCTAATGGAGCAATCAT 415892
Query 18127 TTATCGTAATGAAATCATTCAAGGTGACTTCAATAAAAATGCATTCTACAAAGTTGGTGG 18186
| || ||| | ||| | || || || ||| || || |||||| |||||||
Sbjct 415893 TCTAAACAACGAATTAATTGAGGGGGATTTACGCAAACGAGCTTTTTACAAAATTGGTGG 415952
Query 18187 TAGCATTAAACATCGCGATGTGAACTCCAATGCAAAAGTAACTCCGGAAAAAATCGGTGC 18246
| || |||| || || || |||||| | || ||||| || | ||||||| ||| |
Sbjct 415953 TTCTGTTGAACACCGTGACGTAAACTCCGACGCTAAAGTCACCGCT-AAAAAATTGGTTC 416011
Query 18247 AGGTGAGTCTGTAGGTGTAAAAATTCCATATAAATATGGTCCTTATGCATCAACTGAAGA 18306
||||| ||||| || ||| | |||| |||||| || || ||| | | || |||||
Sbjct 416012 TGGTGAAATGGTAGGCGTGAAAGTACCATTTAAATACGGACCATATCAAACGACCGAAGA 416071
Query 18307 GGCATTTAAGCGCCGTGCTCGTACACCAGAAGAATTTGCTATGGTTGTTGGTTACGATCT 18366
|| ||||| | || ||||| | || ||||| ||| | ||| |||| || | |||
Sbjct 416072 AGCGTTTAAAAGACGCGCTCGCAGTCCTGAAGAGTTTTCAATGCTTGTGGGGCAGGATTA 416131
Query 18367 TGCAGATGCATTGGTTGCAGGCCGATTAGAGTACAGTT----TAGCTTCTTTAAAAGCTG 18422
|||||||||| | ||| ||| ||| | | | | | || ||| | |||||
Sbjct 416132 TGCAGATGCAGTACTTGAAGG----TTATATTGCTTATGCAATGGCCTCTCTTAAAGCGT 416187
Query 18423 CTATTTCTAGT--AATCCCGATATGGTTGCGAAAGGAAGTATCGTTGTTGATGGCCGCAA 18480
|||| | || || | ||||||||||| || ||||| | | |||||| ||
Sbjct 416188 CTAT--CATGTCAAACGCTGATATGGTTGCATCAGCGAGTATTGCTACAGATGGCAAGAA 416245
Query 18481 AGCATTAACTCGTGGTATGCGAAAGTTTGGTGATAAGTTTGGCCGAATTGGCTTATGGGT 18540
|||||||||| || ||||| || ||||||||| | | || |||| || |||||
Sbjct 416246 AGCATTAACTAAAGGCATGCGTAAATTTGGTGATCGATCAGCTCGTATTGCATTGTGGGT 416305
Query 18541 GATGAACTCAGATACATATTTCGATATTGTCGATGATGCTATCACTAAGCAAATTTACGG 18600
||| | || ||||| || | || ||| | || || ||| | |||| |||
Sbjct 416306 AATGGATAGTACCACTTATTTTGACTTAGTAGATCAAGCGATTACTGACAAAATATACAA 416365
Query 18601 TGAATCTGAAATCGTTATCTATGGTGGTTTACCAGGAACCTTAGGAAAGCCGGTATTGGT 18660
||| | || || ||||||||||||||| ||| || || ||||| ||||| ||| | ||
Sbjct 416366 CGAAGCAGATATTGTTATCTATGGTGGTCAACCGGGTACATTAGGTAAGCCAGTACTAGT 416425
Query 18661 GACGGATGCTGTAGGTGATAACGATGCTTTTGGCTTGCAGTATGGTGCTGTAACAGTAAC 18720
|| ||| | | || | | || |||||| ||||||| ||| |||||||| || ||
Sbjct 416426 TACTGATAAGGCACCTGTTGATAGTGTTTTTGGTTTGCAGTCTGGCGCTGTAACGGTTAC 416485
Query 18721 TGAATCACAAGTACCGGGCTTCCGAGCTTATGACATCAATGATGAAGAAAACTTAGCAAT 18780
||||||||| ||||||||||||| ||| || ||||| ||||||| | |||||
Sbjct 416486 TGAATCACAGTTACCGGGCTTCCGCAGTTACCCTATTGATGATCAAGAAAATATTGCAAT 416545
Query 18781 CGGTATGCGTGCTGAAGGTGCATTTAACCTAGATATTCTTGGTTATAGTTGG 18832
|| | | |||||||| | ||||||||||| | | |||||||| |||
Sbjct 416546 GGGGTTCAGAGCTGAAGGAACTTTTAACCTAGACTTATTAGGTTATAGCTGG 416597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145000498556704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |