Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq2697 96.9 1e-15 seq2369 86.0 3e-12 >seq2697 Length=66574 Score = 96.9 bits (106), Expect = 1e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 52580 CACGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAGCCGGGCGGCATGCTCGTGTTC 52639 |||||||| ||||||||||| | | ||| ||| ||| |||||| | | | ||| Sbjct 65898 CACGACTATTTCTTCGCCAAAGCGCTGGACAAGGTGCGGCCCGGCGGCGTCATTGCTTTC 65839 Query 52640 GTCACCAGCAAGGGCACGATGGACAAGGCGAGCGACCGCGCGCGCCGCTACCTCGCCGAC 52699 |||||| ||| ||| ||||||||| | |||| || |||||| || || | || Sbjct 65838 GTCACCTCCAAATTCACCATGGACAAGCAGGACGACACCGTGCGCCGGTATATCTCTGAG 65779 Query 52700 CGCGCGAACCTGATCGGCGCCATGCGGCTGCCGCAGACCGCGTTCAAGGACAACGCCGGC 52759 ||||| | || || ||||| | || ||||| | || || |||||| | |||||||| Sbjct 65778 CGCGCCGAGCTCATGGGCGCGCTACGCCTGCCCAACACAGCCTTCAAGAAAAACGCCGGT 65719 Query 52760 ACGGAAGTCGTGACCGACGTGCTATTCCTCCAGAAGCG 52797 || || ||| ||||| | || ||||| | ||||| Sbjct 65718 ACCGAGGTCACCACCGATATCCTGTTCCTGAAAAAGCG 65681 >seq2369 Length=78395 Score = 86.0 bits (94), Expect = 3e-12 Identities = 135/192 (70%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 54374 GTCGGCGCGGGCAAGACGTTCACGATGATCGCGACCGGCATGGAGG---AGCGCCGGCTG 54430 ||||||||||||||||| || |||| | || ||| ||||||| ||||| ||| Sbjct 77794 GTCGGCGCGGGCAAGACCTTTGAGATGGTGGCCGCCGCGATGGAGGGCAAGCGC---CTG 77738 Query 54431 GGCCTGTCCAACAAGCCGATGTATGCGGTGCCGAACCACATGCTCGCGCAGTTCGCGCGC 54490 || || | || |||| |||| ||| ||||| |||||||| ||| ||| ||||| | Sbjct 77737 GGGCTTTGCACCAAGAGCATGTTTGCCGTGCCCAACCACATCATCGACCAGATCGCGTCC 77678 Query 54491 GAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGGACGAGCAGAATTTCCAT 54550 || ||||| || ||||| |||| ||||| | || ||| | || || | || | Sbjct 77677 GACTTCCTGCGCCTCTACCCCTCCGCCAACATTCTCGTGGCGCAGAAGAAGGACTTTGAA 77618 Query 54551 ACGCACAACCGC 54562 | || ||||||| Sbjct 77617 AAGCGCAACCGC 77606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201260770175256