Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019921.1 Length=42461 Score E Sequences producing significant alignments: (Bits) Value seq6928 132 1e-26 >seq6928 Length=39225 Score = 132 bits (146), Expect = 1e-26 Identities = 269/396 (68%), Gaps = 4/396 (1%) Strand=Plus/Minus Query 28046 TTACGCGTGCAATGGGTGATGCAGGTATTGAAGCTGATGAGTATCAAAGTGTACTTGATA 28105 |||| ||||| ||||| ||||| | ||| | || |||| ||| | ||| | |||| Sbjct 11146 TTACCCGTGCTATGGGGGATGCTGAGATTAATGCCAATGAATATGGTACTGTCTTGGATA 11087 Query 28106 TGGTAGCGAAAGCAGCACAGGCTAGCGGTATAAGTGTTGATACATTAGCTGATAGCATTA 28165 || | | ||| || || ||||| | ||||| ||||| | | | | Sbjct 11086 TGCTGACCGTAGCGGCGCAAAAGAGCGGGGTTTCAATTGATTCATTAACCGGAAATCTGG 11027 Query 28166 CTAAATACGGTGCTCCAATGAGGGCTATGGGCTTTGAGATGAAAGAATCAATCGCTTTAT 28225 | ||||| || || || ||| | || | || |||| | | || ||||| || | | Sbjct 11026 CGAAATATGGCGCGCCTATGCGTGCGCTTGGGCTTGATACGCAAACTTCAATTGCGATGT 10967 Query 28226 TCTCTCAATGGGAGAAATCAGGTGTTAATACTGAAATAGCCTTCAGTGGTTTGAAAAAAG 28285 | | |||||| ||| | |||||||||||||| || || ||||| || ||||||| | Sbjct 10966 TTGCCGGATGGGAAAAAGCGGGTGTTAATACTGAGATTGCATTCAGCGGGATGAAAAAGG 10907 Query 28286 CTATATCCAATTGGGGTAAAGCGGGTAAAGACCCAAGAGAAGAATTTAAGAAGACATTAG 28345 | || ||||| ||||| || || |||||| | || | |||||| || ||| | | Sbjct 10906 CAATTTCCAACTGGGGAGCCGCTGGAAAAGACGCGAGTGTAGAATTCGGAAAAACAAT-G 10848 Query 28346 CAGAAATTGAAAGGA--CACCGGATATAGCTAGCGCAACAAGTTTAGCGATTGAAGCATT 28403 ||| | | ||||| | |||||||| || | || || ||| | |||||||||||||| Sbjct 10847 CAGCAGAT-CAAGGATGCGCCGGATATTGCAACAGCGACCAGTATGGCGATTGAAGCATT 10789 Query 28404 TGGTGCAAAAGCAGGTCCTGATTTAGCAGATGCTAT 28439 ||| || ||||| || || |||||||| || ||||| Sbjct 10788 TGGAGCGAAAGCCGGCCCCGATTTAGCGGACGCTAT 10753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135713633461392