Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq373 147 3e-30
seq1991 140 5e-28
seq1619 107 3e-18
seq2441 105 1e-17
seq1948 100 4e-16
seq1814 91.5 2e-13
seq2298 86.0 1e-11
>seq373
Length=1274844
Score = 147 bits (162), Expect = 3e-30
Identities = 221/309 (72%), Gaps = 4/309 (1%)
Strand=Plus/Plus
Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCAGAC 122422
|||||||||||||| || ||| ||||| | ||||| || ||||| || | |||
Sbjct 928972 ATGAAACAATATCTTGATTTAATGCGTCATGTTCGGGATAACGGAGTATTTAAGGAAGAT 929031
Query 122423 CGTACGGGCACGGGCACCCTGTCGT-TATTCGGCGCACAAATGCGCTTTGACCT-GCAAA 122480
||||| || ||||| || | | || |||| || |||||||||||| | || || |
Sbjct 929032 CGTACAGGAACGGGTACT-TATAGTGTATTTGGTTATCAAATGCGCTTTAATCTAGCGGA 929090
Query 122481 AAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTC 122540
||||| ||| | || || || ||||| || || || || ||||||||| |
Sbjct 929091 TGGGTTT-CCGTTAGTTACCACTAAAAAATGCCATCTTAAGTCGATTATCCATGAGTTAT 929149
Query 122541 TGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCT 122600
||||||| | |||||||||||| || | || || ||||| || || ||||| |
Sbjct 929150 TGTGGTTTTTGCAGGGCGATACCAATATTCGTTACCTTAAAGAAAATGGTGTGAGTATTT 929209
Query 122601 GGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGTG 122660
||||||||||||| |||||| | ||| || | ||||| ||||| ||| | |||||||||
Sbjct 929210 GGGATGAATGGGCTGATGAAAACGGTGATTTAGGCCCTGTGTATGGTTATCAATGGCGTT 929269
Query 122661 AGTGGCCAG 122669
|||||||
Sbjct 929270 CATGGCCAG 929278
>seq1991
Length=147557
Score = 140 bits (154), Expect = 5e-28
Identities = 189/252 (75%), Gaps = 11/252 (4%)
Strand=Plus/Minus
Query 122412 AAAAAGCAGACCGTACGGGCACGGGCACCCT--GTCGTTATTCGGCGCACAA-ATGCGCT 122468
||| ||| ||||| || || |||||||| | || ||| ||||| |||| | |||||||
Sbjct 6619 AAAGAGC-GACCGGACAGGAACGGGCACGATCAGT-GTT-TTCGG-GCACCAGATGCGCT 6564
Query 122469 TTGACCTGCAAAAAGG--TTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCAT 122526
||||||| ||| ||| ||||||| | | || || ||||| | || || ||||| ||
Sbjct 6563 TTGACCT-CAATGAGGGTTTTCCCG-TACTGACCACAAAAAAACTGCATCTACGCTCGAT 6506
Query 122527 CATCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAA 122586
||| ||||| ||||||||||| |||| ||| |||||||| || | ||||| | || ||
Sbjct 6505 CATACATGAACTTCTGTGGTTTCTCAAGGGAGATACCAATATAAAATATCTTCACGATAA 6446
Query 122587 CAACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGG 122646
||||| | || ||||| || ||||| |||| || || || || |||||||| |||||
Sbjct 6445 TAACGTTACGATATGGGACGAGTGGGCGGATGCCGACGGCAACCTGGGCCCGGTCTACGG 6386
Query 122647 TAAGCAATGGCG 122658
| || |||||
Sbjct 6385 ATACCAGTGGCG 6374
>seq1619
Length=182432
Score = 107 bits (118), Expect = 3e-18
Identities = 83/98 (85%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 167025 AGGGGCATAGCTCAGCTGGCAGAGCACCGGTCTCCAAAACCGGGTGTCCAAGGTTCGAAT 167084
||||| ||||||||| ||| |||||| ||||||||||||||| ||| | | |||||||||
Sbjct 25688 AGGGGTATAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCGTGCCGAGGGTTCGAAT 25629
Query 167085 CCTTGTGCCCCTGCCAAATTTAGCCTGCAAGTTCAGTT 167122
|||| ||||||||||||| | ||| | |||||||||
Sbjct 25628 CCTTCTGCCCCTGCCAAA--TGGCCCGGTAGTTCAGTT 25593
>seq2441
Length=2995558
Score = 105 bits (116), Expect = 1e-17
Identities = 211/310 (68%), Gaps = 2/310 (1%)
Strand=Plus/Minus
Query 122362 CATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGG-GCACGAAAAAGCAG 122420
||||||||||||| |||| ||||| | || | | | || | || | |||| ||
Sbjct 2867187 CATGAAACAATATTTGGATTTACTAGATAGAGTACTAAAAGAAGGCGTAC-ACAAAGAAG 2867129
Query 122421 ACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAA 122480
||||||| ||||| || || | ||||||| || ||||| |||||||| |
Sbjct 2867128 ACCGTACAGGCACAGGAACAATCAGCGTATTCGGACACCAGATGCGTTTTGACCTTAACG 2867069
Query 122481 AAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTC 122540
| |||||||| | || ||||| ||| ||||||| ||||| || ||||| ||||
Sbjct 2867068 ATGGTTTCCCATGCCTGACTACCAAGAAGCTTCACCTGAAATCCATTATTCATGAACTTC 2867009
Query 122541 TGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCT 122600
| ||||| | | || ||||| || | |||| || |||||||| || ||||||
Sbjct 2867008 TATGGTTTTTGAAAGGTGATACAAATGTTAAGTACCTCCAAGACAACGGAGTACGTATCT 2866949
Query 122601 GGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGTG 122660
|| ||||||||||||| || | || | | || | || || || | |||||||||
Sbjct 2866948 GGAATGAATGGGCAGACGAGAACGGAGAATTAGGTCACGTTTATGGATACCAATGGCGTT 2866889
Query 122661 AGTGGCCAGA 122670
||||| ||
Sbjct 2866888 CCTGGCCTGA 2866879
Score = 100 bits (110), Expect = 4e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 122459 CAAATGCGCTTTGACCTGCAAAAAGGTTTCCCGCTGG-TCACGACCAAAAAGGTTCACCT 122517
|||||| | ||| | ||| || | ||||| || ||| | || |||||||| |||| |
Sbjct 2670394 CAAATGAGATTTAATCTGGAAGATGGTTTTCC-CTGCCTTACTACCAAAAAACTTCATTT 2670336
Query 122518 CCGCTCCATCATCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCT 122577
||||||||||| || ||| |||||||||| | || ||||| || | | || ||
Sbjct 2670335 AAAGTCCATCATCCACGAACTTTTGTGGTTCCTTAAAGGTGATACAAATGTAAAATACCT 2670276
Query 122578 GAAAGACAACAACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCC 122637
|||| ||| || |||||||| |||||||||| |||||| | || || | || |
Sbjct 2670275 ACAAGAGAACGGGGTTCGTATCTGGAATGAATGGGCGGATGAAAACGGAGATTTGGGTCA 2670216
Query 122638 GGTGTACGGTAAGCAATGGCGTGAGTGGCCAGAT 122671
|| || ||| | ||||||||| ||||| |||
Sbjct 2670215 TGTCTATGGTTATCAATGGCGTTCCTGGCCTGAT 2670182
>seq1948
Length=475166
Score = 100 bits (110), Expect = 4e-16
Identities = 179/259 (69%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 122414 AAAGCAGACCGTACGGGCACGGGCACCCTGTCGT-TATTCGGCGCACAAATGCGCTTTGA 122472
|||| |||||| || || || || ||| | | || |||| || || ||||| ||| |
Sbjct 215256 AAAGAAGACCGAACCGGAACCGGAACC-TATAGTGTATTTGGTCACCAGATGCGGTTTAA 215314
Query 122473 CCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCA 122532
| || || |||| || || || | || |||||||| | || || || || || |
Sbjct 215315 CATGGAAGAAGGATTTCCTTTGCTTACCACCAAAAAATTACATCTTAAATCGATTATATA 215374
Query 122533 TGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGT 122592
||||| |||||||| || | || || || ||| | ||| || |||| | ||
Sbjct 215375 CGAGCTACTGTGGTTTCTGAAAGGAGACACGAACGCTAAATATTTGCAAGATCATGGTGT 215434
Query 122593 CAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCA 122652
|||||||| | |||||||||||||| |||||||||| || | | ||||| | ||
Sbjct 215435 TCGTATCTGGAACGAATGGGCAGATGAGAATGGTAATCTTGGACATATTTACGGGTATCA 215494
Query 122653 ATGGCGTGAGTGGCCAGAT 122671
||||||| |||||| |||
Sbjct 215495 ATGGCGTTCGTGGCCCGAT 215513
>seq1814
Length=228699
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 167024 TAGGGGCATAGCTCAGCTGGCAGAGCACCGGTCTCCAAAACCGGGTGTCCAAGGTTCGAA 167083
|||||| ||||||||| ||| ||||||| ||||||||||||| |||||| |||||||
Sbjct 141029 TAGGGGTATAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGTGAGTTCGAA 141088
Query 167084 TCCTTGTGCCCCTGCCAAATTTA 167106
|| | ||||||||||| |||||
Sbjct 141089 TCTTACTGCCCCTGCCATATTTA 141111
>seq2298
Length=83281
Score = 86.0 bits (94), Expect = 1e-11
Identities = 170/252 (67%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 122362 CATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCAGA 122421
|||||||||||||| || | | || | ||| || ||||| || ||| ||
Sbjct 73507 CATGAAACAATATCAAGATCTTTTACGGCATGTTATGGATAACGGTAACTTTAAAAGTGA 73448
Query 122422 CCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAA 122481
||||||||| ||||| || ||||||| |||||||| ||| | || || |
Sbjct 73447 CCGTACGGGAACGGGTACAAAAAGTGTATTCGGATATCAAATGCGTTTTAATTTGGAAGA 73388
Query 122482 AGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCT 122541
|||||||| | | ||||| || || | || || || || || ||||| | ||
Sbjct 73387 GGGTTTCCCTGTTTTAACGACAAAGAAACTGCATCTGAAATCGATTATTTATGAGTTGCT 73328
Query 122542 GTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 122601
||||| | | ||| |||||||| || | ||||| ||||| || ||| ||||| ||
Sbjct 73327 ATGGTTTTTAAAGGGTGATACCAATATTAAATATCTAAAAGATCACGGCGTTAGTATTTG 73268
Query 122602 GGATGAATGGGC 122613
||| ||||||||
Sbjct 73267 GGACGAATGGGC 73256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777391011843200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |