Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2315 91.5 1e-13 seq783 87.8 2e-12 >seq2315 Length=138946 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || || || || || ||||| ||| |||||||||| Sbjct 32993 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACAATTACATTGGAAGTGGAACCTTCA 33052 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || ||||| | || || || |||||| | || ||| || Sbjct 33053 GATACCATTGAGAATGTAAAAGCAAAGATTCAA-GATAAGGAGGGAATCCCTCCAGACCA 33111 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 |||||||| || ||||| |||||||| | || ||| || | ||| | | ||||| Sbjct 33112 GCAGAGACTCATTTTTGCTGGCAAACAGCTCGAGGATGGTCGCACACTTT--CAGATTAC 33169 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||| ||||| ||||||||||| |||| Sbjct 33170 AATATTCAGAAAGAGTCTACTCTGCATTTGGT 33201 >seq783 Length=580412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||||||||| | || || ||||| ||||| ||| || |||| Sbjct 390128 AATGCAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTC 390187 Query 28613 AGAGACGGTGGCCGATCTC-AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || ||| | | || || |||| |||| || ||||| || || | ||| ||| | Sbjct 390188 GGATACGATCGAGAATGTCAAAGCCAAAATTC-AGGACAAGGAAGGCATTCCCCCAGACC 390246 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||||||| | |||||||| ||||| || | || || |||| | | ||||| | Sbjct 390247 AACAGAGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACA 390306 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 ||||||| ||||||||||| || || Sbjct 390307 ACATTCAGAAAGAATCTACACTCCA 390331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425276262876168