Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_020199.1 Length=47252 Score E Sequences producing significant alignments: (Bits) Value seq14302 98.7 3e-16 >seq14302 Length=8876 Score = 98.7 bits (108), Expect = 3e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 16946 TTACAGGTAAAGAAGCCTATGAGGCCTTACAAGGCGTTTGGCTAATGGAAATGGCAGAAC 17005 |||| ||||||||||||| || | ||||||| |||||| || || | | ||||| Sbjct 8697 TTACGGGTAAAGAAGCCTTAGAAAGCATACAAGGGTCTTGGCTTATTGAGTTAGGAGAAC 8638 Query 17006 TTGCAGCTACAAGAAAAGCTGAAGTTGAAGCTATTAAGCATTTCATATCTAAACAAGTTG 17065 |||| | | | ||||||||||| || || ||||||| ||| || |||| ||| | Sbjct 8637 TTGCCGGGTTACGTAAAGCTGAAGTAGACGCAGTTAAGCACTTCGTAAGTAAAAAAGAAG 8578 Query 17066 ACCGGTTTCGTGTTGCTTATGGACATTATATTGAAGATTTTCCAAGGCAATGTATTTTCA 17125 |||| ||| | || ||||| || | | | ||| | || || ||| || | ||| Sbjct 8577 ACCGTTTTAGAGTGGCTTACGGCAAACGTGTAGAACACTTCCCCCGGCGTTGCGTCTTCT 8518 Query 17126 TTGGTACAACTAATAAAGTTGATTTCTTAAGAGA 17159 | || ||||||||| | | ||||| |||||||| Sbjct 8517 TCGGAACAACTAATGAGGAAGATTTTTTAAGAGA 8484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151040319879456