Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq1604 95.1 1e-14
seq4222 93.3 5e-14
seq2884 93.3 5e-14
seq1752 89.7 6e-13
seq1094 87.8 2e-12
seq179 84.2 2e-11
>seq1604
Length=351056
Score = 95.1 bits (104), Expect = 1e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 156612 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 156671
||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||
Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348
Query 156672 GTCTG 156676
| |||
Sbjct 255347 GACTG 255343
>seq4222
Length=21366
Score = 93.3 bits (102), Expect = 5e-14
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 156614 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 156673
||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct 17754 GTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCACAGGTTCGAATCCTGT 17813
Query 156674 C 156674
|
Sbjct 17814 C 17814
>seq2884
Length=40100
Score = 93.3 bits (102), Expect = 5e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 157689 ACGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748
|||||| ||||||||| | ||||||||| ||||||||||||||| | | |||||||||||
Sbjct 19825 ACGGGGCGTAGCGCAGGT-GGTAGCGCGCTTGCTTTGGGAGCAAGATGCCGCAGGTTCGA 19883
Query 157749 ATCCTGTCACCCCGAC 157764
||||||| |||||||
Sbjct 19884 GTCCTGTCGCCCCGAC 19899
>seq1752
Length=186427
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 156614 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTG 156672
||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||
Sbjct 14697 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCTG 14639
Score = 84.2 bits (92), Expect = 2e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 157690 CGGGGTGTAGCGCAGCTTGGT-AGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748
|||||||||||| || ||| | |||| ||||||||||||| |||||||||||||||
Sbjct 14823 CGGGGTGTAGCGTAGTCCGGTTATCGCGCCTGCTTTGGGAGCAGGAGGTCGCAGGTTCGA 14764
Query 157749 ATCCTGTCACCCCGAC 157764
|||||| |||||||||
Sbjct 14763 ATCCTGCCACCCCGAC 14748
>seq1094
Length=2708314
Score = 87.8 bits (96), Expect = 2e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 156606 ATGGGTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCG 156665
|||| ||||||||||| ||||||||||||| ||||||||| || |||||||||||||
Sbjct 606435 ATGGTCCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGGGTCACAGGTTCG 606494
Query 156666 AGTCCTGTCTG 156676
| |||||||||
Sbjct 606495 AATCCTGTCTG 606505
>seq179
Length=2312354
Score = 84.2 bits (92), Expect = 2e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 157690 CGGGGTGTAGCGCAGCTTGGT-AGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748
||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||
Sbjct 479428 CGGGGTGTAGCGCAGTCCGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGCAGGTTCGA 479369
Query 157749 ATCCTGTCACCCCGAC 157764
|||||| |||||||||
Sbjct 479368 ATCCTGCCACCCCGAC 479353
Score = 84.2 bits (92), Expect = 2e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand=Plus/Minus
Query 156609 GGTC-AGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAG 156667
|||| |||||||||| ||||||||||||| ||||||||||| || |||| |||||||||
Sbjct 786961 GGTCTAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAA 786902
Query 156668 TCCTGTCT 156675
||||| ||
Sbjct 786901 TCCTGACT 786894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547577453142720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |