Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq1690 107 2e-18 seq385 91.5 2e-13 seq3213 89.7 7e-13 >seq1690 Length=1574822 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 74130 GTGGAGAATAGGAGACTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTACCAGC 74189 ||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||| | Sbjct 1439783 GTGGAGATTAGGAGAGTCGAACTCCTGACATCCTGCTTGCAAGGCAGGTGCTCTACCAAC 1439842 Query 74190 TGAGCTAATTCCCC 74203 |||||||| ||||| Sbjct 1439843 TGAGCTAAATCCCC 1439856 >seq385 Length=1145925 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 74130 GTGGAGAATAGGAGACTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTA-CCAG 74188 |||||||||| | || |||||| | |||| |||||| ||||| |||||||||||| |||| Sbjct 504652 GTGGAGAATAAGGGAGTCGAACCCTTGACCTCCTGCGTGCAAGGCAGGCGCTCTAGCCAG 504593 Query 74189 CTGAGCTAATTCCCC 74203 ||||||||||||||| Sbjct 504592 CTGAGCTAATTCCCC 504578 >seq3213 Length=2170589 Score = 89.7 bits (98), Expect = 7e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 74130 GTGGAGAATAGGAGACTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTACCAGC 74189 |||||| |||||||| |||||||||| || ||||| ||||||||||| ||||||||| Sbjct 229519 GTGGAGGATAGGAGAATCGAACTCCTCACCCCCTGCGTGCAAAGCAGGTGCTCTACCAAA 229460 Query 74190 TGAGCTAATTCCCC 74203 ||||||||| |||| Sbjct 229459 TGAGCTAATCCCCC 229446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633317274135360