Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq179 212 7e-50
seq2330 150 2e-31
seq1702 145 9e-30
seq2441 122 1e-22
seq1535 118 1e-21
seq76 118 1e-21
seq788 111 2e-19
seq1232 107 2e-18
seq126 105 8e-18
seq875 91.5 2e-13
>seq179
Length=2312354
Score = 212 bits (234), Expect = 7e-50
Identities = 369/524 (70%), Gaps = 16/524 (3%)
Strand=Plus/Plus
Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGA-ATACA 138229
||||||| |||||||| |||||||| ||||||||||| ||||| || || ||| | ||
Sbjct 1073789 AGATGTTCTGCTACACATATAGGACCAACGCCAGGACCACCACCACCGTGAGGACCTGCA 1073848
Query 138230 GAATGTCTTATGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTA 138288
|| || ||||||||||||| ||| ||||| ||||| || ||| | || |||| |
Sbjct 1073849 -AAAGTTTTATGTAAATTTAAATGGCATACGTCTGCTCCGATA-AATCCGGGATTTGTAA 1073906
Query 138289 GACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA 138348
| || ||||| ||||| | |||||||| || | |||||| || || || ||||||||||
Sbjct 1073907 GTCCAACCTGGGCATTCATGTTTGCACCGTCCATATATACTTGTCCTCCGTTGTCATGAA 1073966
Query 138349 CGATCTTACATATC-TGTCTGATGT--TTGTTTCAAATACACCATGAGTCGATGGATATG 138405
| || || |||| | ||| || | | ||||||| || ||||| || || |||||||
Sbjct 1073967 CTATTTT---TATCATCTCTAATATCCTGCTTTCAAAAACTCCATGGGTAGACGGATATG 1074023
Query 138406 TAATCATAATACATGAGAGTTCAAATGTA--TTCATGATTGCTTTCTTCTCTAGATCTTT 138463
| ||||| || | || | | | || |||| | ||||| || | |||||
Sbjct 1074024 TTATCATTGTAGCAGCAAGCTTATCTTTATGTTCA--GTAGCTTTTGCCTTGAAATCTTC 1074081
Query 138464 GATGTCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGAC 138523
| || || || || | ||||||| || ||| | || | || ||| |||||||| ||
Sbjct 1074082 AACATCGATATTTCCTTTTTCATCACTTTTTACAACAACTATTTCCATGCCTGCCATAAC 1074141
Query 138524 TGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583
|||||| |||||||| |||||||| || || || ||||| |||| ||| | | |
Sbjct 1074142 TGCACTTGCAGGATTTGTTCCATGGGCAGATGAAGGGATCAGGCATATATTACGATGAGA 1074201
Query 138584 ATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACC-CTGTG 138642
||||||| | || ||||||| || ||| | | | ||| | | || || ||| |
Sbjct 1074202 ATCTCCTCTTGATTTATGATATTCTCTGATAACCATTAATCCGGTGTGTTCGCCACTG-G 1074260
Query 138643 ATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATA 138686
||||| |||||||||| ||| | | |||| ||||| |||
Sbjct 1074261 CTCCTGAATTAGGTTGTAGTGAAGTTGCTGCAAATCCTGTTATA 1074304
>seq2330
Length=1066040
Score = 150 bits (166), Expect = 2e-31
Identities = 185/253 (73%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220
|||||| | ||||||| ||||||| ||||| ||| | || || || ||||| |||||
Sbjct 690752 AAATGGAATAAGATGTTCCGCTACACAGATAGGGCCTTCACCCGGTCCACCACCACCATG 690811
Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280
|||||| ||||| ||||| | ||| || ||||| |||||||||||| | | ||
Sbjct 690812 AGGAATAGCAAATGTTTTATGCAGATTGAGGTGACAAACATCTGCACCAATATAGCCGGG 690871
Query 138281 TTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATT 138340
|| | ||| || ||||| ||||| | |||||| ||||| | |||||| || || || |
Sbjct 690872 GTTGGTTAGTCCGACCTGCGCATTCATATTTGCTCCATCCATATATACTTGTCCTCCGTG 690931
Query 138341 GTCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGG 138400
| || || |||||||| || | | ||| | | | || || | ||||||||| || ||
Sbjct 690932 TTGGTGTACAATCTTACACATTTCCCGGATTTCTTTCTCGAAGATACCATGAGTAGACGG 690991
Query 138401 ATATGTAATCATA 138413
||| || ||||||
Sbjct 690992 ATAGGTGATCATA 691004
Score = 82.4 bits (90), Expect = 9e-11
Identities = 116/163 (71%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922
||||| || | || |||||||||||||||| ||| ||| | || || || | |||
Sbjct 692496 GCCTCAGCACCAGCCGTTGCTTCATCTAATAAAGAACAGTTGGATAACGGCAAAGCGGTA 692555
Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982
||||| | | | || || |||| | | ||||||||| | || || || || ||
Sbjct 692556 AGTTCACTCACCATTGTCTGAAAATTCATCAGAGCTTCCAAACGCCCTTGCGAAATTTCC 692615
Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAA 140025
|| |||||||| || || ||||| |||||| ||| |||||||
Sbjct 692616 GCCTGATAGGGTGTATATGATGTATACCAAACAGGGTTCTCAA 692658
>seq1702
Length=707479
Score = 145 bits (160), Expect = 9e-30
Identities = 179/242 (74%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 138173 ATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAA 138232
||||| |||||||| ||||| ||| |||| ||||| || || || || || || ||
Sbjct 622012 ATGTTCTGCTACACATATAGGTCCTTCGCCCGGACCGCCGCCGCCGTGAGGGATGGCAAA 621953
Query 138233 TGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCA-CATGGTTTTGCTAGAC 138291
||||||||||||||| || || || || || ||||| || | | || || | || |
Sbjct 621952 TGTCTTATGTAAATTGAGGTGGCAAACGTCAGCACC-TATAAAGCCCGGATTGGTAAGGC 621894
Query 138292 CTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGA 138351
||||||||||||| | |||||| || || | ||||||||| |||||| | ||| || |
Sbjct 621893 CTACCTGTGCATTCATATTTGCCCCGTCCATATATACCTGTCCACCAAATTGATGTACTA 621834
Query 138352 TCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCA 138411
||| ||| || | ||||| | | |||| || | |||||| || || || || |||||||
Sbjct 621833 TCTCACACATTTTCCTGATCTCTTTTTCGAAAATACCATGTGTAGAAGGGTAAGTAATCA 621774
Query 138412 TA 138413
||
Sbjct 621773 TA 621772
>seq2441
Length=2995558
Score = 122 bits (134), Expect = 1e-22
Identities = 178/248 (72%), Gaps = 8/248 (3%)
Strand=Plus/Minus
Query 138169 TGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATAC 138228
||||||||| ||||||| ||||| ||||| || || || || || ||||||||| |
Sbjct 368530 TGAGATGTTCGGCTACACATATAGGCCCTACACCCGGGCCGCCTCCGCCATGTGGAGAAG 368471
Query 138229 AGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTA 138288
||||| |||||||| || || |||||||| ||||| ||| | | || || | |
Sbjct 368470 CAAATGTTTTATGTAAGTTCAGGTGACATACGTCTGCTCCAATGAATCCGGGGTTAGTCA 368411
Query 138289 GACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCA---TTGTC-A 138344
| |||||||| ||||| | ||| |||||||| | |||||||| | || |||| |
Sbjct 368410 GTCCTACCTGCGCATTCATATTGGCACCATCCATGTATACCTGTGCTCCGCACTTGTGTA 368351
Query 138345 TGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATAT 138404
|||| ||| ||| || | | ||| | ||||| || | || ||||| || || |||
Sbjct 368350 TGAA--ATC--ACAAATTTCTACGATTTCAGTTTCGAAAATGCCGTGAGTGGAAGGGTAT 368295
Query 138405 GTAATCAT 138412
||||||||
Sbjct 368294 GTAATCAT 368287
>seq1535
Length=1988416
Score = 118 bits (130), Expect = 1e-21
Identities = 180/254 (71%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220
||| ||| | | |||| |||||| | ||||| || || || || || ||||| || ||
Sbjct 337278 AAAAGGTTTTAAATGTGATGCTACGCATATAGGTCCAACACCCGGTCCACCACCACCGTG 337337
Query 138221 TGGA-ATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279
||| || || ||||||||||||| ||||| |||||||||||| || ||| | | | |
Sbjct 337338 AGGAGATGCA-AATGTCTTATGTAGATTTAAATGACATACATCAGCTCCAATGACTCCCG 337396
Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339
| || | || ||| ||||| ||||| | || || ||||| | |||| || |||||
Sbjct 337397 GATTGGTTAAACCCACCTGAGCATTCATGTTGGCGCCATCCATGTATATTTGTCCACCGC 337456
Query 138340 TGTCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATG 138399
||||| || | ||| || | | |||| | | |||||| | || ||||| || |
Sbjct 337457 AACTATGAATAATATCACACATTTTTTTGATATCAGCTTCAAAAATTCCGTGAGTAGAAG 337516
Query 138400 GATATGTAATCATA 138413
| ||||| ||||||
Sbjct 337517 GGTATGTTATCATA 337530
Score = 96.9 bits (106), Expect = 4e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922
|| || || || ||||| |||||||| |||| ||| ||||| || ||| | ||||||
Sbjct 339004 GCTTCAGCAGCAGCAGTAGCTTCATCCAATAAAGAGCAGTTTGTTAGTGGAAGTCCTGTT 339063
Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982
|| || | | || || | || ||||||||||| || | ||||||||| || |||
Sbjct 339064 AGATCACAAACCATTGTCTGAAAGTTCAATAAAGCTTCTAAACGTCCCTGAGAAATTTCA 339123
Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCG 140035
|| || ||||||||||| || || ||||| || || |||| ||||| ||
Sbjct 339124 GCCTGGTAGGGAGTGTATGAGGTATACCAGACGGGGTTTTCAAATACGTTACG 339176
>seq76
Length=2859269
Score = 118 bits (130), Expect = 1e-21
Identities = 94/113 (83%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331
|||||||| | ||||| | | ||||||||||||| |||| ||| ||||| || ||||||
Sbjct 1828138 CCATGATAAACAGCATACATTGCAGACATATTTGCTAGCAATGCCTGTGCAGTACAGATG 1828079
Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAA 139384
|| ||||||||||| || ||||| |||||||| ||||| ||||||| ||| ||
Sbjct 1828078 TTGCTGGTTGCTTTATCCCTTCTGATATGCTGTTCTCTTGTTTGTAATGCCAA 1828026
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|| ||||||||||| | || ||||| || || ||||| || || ||||||||||| ||
Sbjct 1862375 ACTCCAATAGGACCCATTCCTGGACCACCCCCACCATGAGGTATGCAGAATGTCTTGTGA 1862316
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| ||| |||||| | ||||| | ||||| || | ||| | ||||| || |||
Sbjct 1862315 AGATTCAGATGAGAAACATCAGATCCATAATCTCCTGGCCGACACAACCCTACTTGGGCA 1862256
Query 138303 TTTAGATTTGCACCATCGAGATATACCT 138330
|| | ||| |||||||| || || ||||
Sbjct 1862255 TTCATATTAGCACCATCCAGGTAGACCT 1862228
>seq788
Length=584067
Score = 111 bits (122), Expect = 2e-19
Identities = 177/252 (70%), Gaps = 4/252 (2%)
Strand=Plus/Minus
Query 139870 CTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTG 139929
|||| || || ||||||||||||| ||| || ||||| || ||||| || | || |
Sbjct 331473 CTGCCGCTGTAGCTTCATCTAATAAAGAAGCATTTGCGATGGGTAAAGAAGTTAAATCCG 331414
Query 139930 TGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGAT 139989
|| | || || |||| || ||||||||||| | || ||||| || || || ||||
Sbjct 331413 AAATCATTGTCTGAAAATTCAACAAAGCTTCCAAACGACCTTGAGAAATTTCCGCCTGAT 331354
Query 139990 AGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGG 140049
| |||||||||| ||||||||| | | ||| |||| |||||||| |||| || | |
Sbjct 331353 AAGGAGTGTAAGCTGTGTACCAGCCTGCATTTTCAAAAACGTTTCTTAGTATTACCGATG 331294
Query 140050 GTGTAATGGTTCCATAGTATCCTTGACCTA--TAAGACTAGGTTTTACTTTGTTTGCTTT 140107
| || || || ||| || || |||| |||| || | | || ||||||| |
Sbjct 331293 GAGTTATCGTATTATAATACCCCATTCCTATGTAAGTCTTG--TATATTTTGTTTTTTGA 331236
Query 140108 TGCTATATTTTT 140119
||| || |||||
Sbjct 331235 TGCAATGTTTTT 331224
>seq1232
Length=396718
Score = 107 bits (118), Expect = 2e-18
Identities = 127/172 (74%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922
|| ||||| ||||| ||||||||||| | || ||| || | | ||||||| |||||
Sbjct 29106 GCTTCTGCAGCTGCTGTTGCTTCATCCAGTAAAGAACAATTGGTCAATGGTAATGCTGTA 29047
Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982
|| || ||| | || || |||| | ||||| || ||||| || || ||||| ||
Sbjct 29046 AGATCACTGACCATTGTCTGAAAATTCAGCAAAGCCTCTAATCTGCCTTGCGATATTTCT 28987
Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTC 140034
|| ||||| ||||| |||||||| ||||| |||||| |||| ||| ||||
Sbjct 28986 GCCTGATATGGAGTATAAGATGTATACCAGACAGGATTTTCAAAAACATTTC 28935
>seq126
Length=3533043
Score = 105 bits (116), Expect = 8e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 139862 TGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGT 139921
||| ||||| || || || ||||| || |||| ||| |||||| | || | ||||||
Sbjct 166565 TGCTTCTGCAGCAGCTGTAGCTTCGTCCAATAAAGAACAGTTTGCCAAGGGAAGTCCTGT 166506
Query 139922 AAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTC 139981
| || | | | |||||| |||| | || ||||||| | || ||||| || ||
Sbjct 166505 TAAATCACTTACCATTGTTTGGAAATTAAGCAAGGCTTCCAGACGGCCTTGAGAAATTTC 166446
Query 139982 AGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTC 140034
||||||||||||||||||||| |||||||| ||||| |||| ||| ||||
Sbjct 166445 AGCTTGATAGGGAGTGTAAGAAGTGTACCATGCTGGATTTTCAAAAACATTTC 166393
>seq875
Length=1099013
Score = 91.5 bits (100), Expect = 2e-13
Identities = 205/308 (67%), Gaps = 0/308 (0%)
Strand=Plus/Minus
Query 139248 GCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCG 139307
|||||| | | || || || ||||| || ||| | || || || || | ||| ||||
Sbjct 908205 GCTATATCTTTTAAACCTTCAGCACCGTGGTATACAGCGTAAAAACCGGCCATTGTTGCT 908146
Query 139308 AGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCT 139367
| || || || ||||| || || || || ||||| || | | | || || || ||
Sbjct 908145 AACAAAGCCTGGGCTGTACATATATTTGAAGTCGCTTTTTCACGTTTGATGTGTTGTTCG 908086
Query 139368 CTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACA 139427
| |||||||| ||||||||||| || | || || | || || |||||
Sbjct 908085 CGGGTTTGTAGGGCTAATCTGTAAGCGGCATGTCCGTAAGCATCTTTGGAGATACCTATG 908026
Query 139428 ATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGA 139487
||||| || ||||| | ||||| | ||| |||||||||| | | ||| ||||
Sbjct 908025 ATTCTTCCGGGTATAGCGCGTTTATATTCATCTTTTGTTGCAAAATAACCGGCAGAAGGA 907966
Query 139488 CCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCC 139547
||||| || ||| ||||||||||| | ||| |||| || | ||| ||| |||
Sbjct 907965 CCTCCATAAAACATCGGAATACCAAAGCGTTGGCTACTTCCGAATACAACATCTGCCCCC 907906
Query 139548 CACTCACC 139555
|| |||||
Sbjct 907905 CATTCACC 907898
Score = 84.2 bits (92), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922
|| || || || ||||||||||||||||| | ||| ||||| | |||| ||||
Sbjct 907581 GCTTCAGCAGCAGCAGTTGCTTCATCTAACAAAGAACAGTTTGTAAGAGGTAGAGCTGTT 907522
Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982
|| || ||| | || ||| | || | ||| ||||| || | ||||| || | |||
Sbjct 907521 AGGTCACAGATAACAGTCTGGAAGTTAAGTAATGCTTCTAAGCGCCCCTGGGAAACTTCA 907462
Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTAT 140041
|| ||||| || || || ||||| |||||| |||||| |||| || || || || ||
Sbjct 907461 GCCTGATAAGGTGTATATGATGTATACCAAACAGGATTTTCAAATACATTGCGTTGAAT 907403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578818968395840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |