Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_020871.1
Length=133057
Score E
Sequences producing significant alignments: (Bits) Value
seq2441 107 2e-18
>seq2441
Length=2995558
Score = 107 bits (118), Expect = 2e-18
Identities = 259/388 (67%), Gaps = 8/388 (2%)
Strand=Plus/Plus
Query 21151 ATTAATGTGCCTTAAAATTATAGATTGGTTTAACAATGAAGTCAATAT--CAACCGTATC 21208
|||||| || |||| ||| | || ||||| || || | ||| || || | |||||
Sbjct 370297 ATTAATTGGCTTTAATATTCAATATAGGTTTTAC--TGTATCCAAAATTACAGCGGTATC 370354
Query 21209 TGTAATGTTCTCTATGATACTCTCTTTCTTTTTATAGGCAAACGGTGCCTCGTCTAGTGT 21268
| |||| || || || | ||| | ||| || || | || | || || |||||
Sbjct 370355 TTTAATAGCTTCCATAATCACATTTTTATCTTTGTATGCCATAGGCGATTCATCCAGTGT 370414
Query 21269 AGACTCCAACACAGAGGAAGACCAAACATCTTTCATTGTATTCTTAAAATCTTCCATTTC 21328
||| || | || |||| ||| ||| ||| ||| ||| |||| || | ||| ||
Sbjct 370415 AGATTCGCATACGGAGGTAGAATAAATTCCTTCCATCTCATTTCTAAATTCATTCATATC 370474
Query 21329 TAGTGTTTCTTTA--GCTTTAGAACGAGACAGTACCCTACCTGCCCCGTGAGGTGCTGAA 21386
|| || ||| | |||| | ||| | ||||| || |||||||| || || || |||
Sbjct 370475 AAGGGT--CTTAAATGCTTGATTACGTGCCAGTATTCTTCCTGCCCCATGTGGAGCCGAA 370532
Query 21387 TTGTTCCAGTCTTCGTTTCCCTTTCCTGTGGCAATGATGCTACCATCACGCATATTTAGT 21446
||||||||||| || | |||||| | ||| | |||||| |||||||| |
Sbjct 370533 CAGTTCCAGTCTTTATTGCTTTTTCCTTCGCAAATCAACAAACCATCGCGCATATTGAAA 370592
Query 21447 GGGATAACTAGCTGTTTTCCTTTAGAGGCATCTGTCGCACCTTTACGAATAACCTTATTA 21506
||||||| | || || || ||| | ||| | | |||||||| ||||||| | | |
Sbjct 370593 GGGATAATCATCTTTTCACCCTTATAAGCACGTATAGCACCTTTTCGAATAATCCAGTCA 370652
Query 21507 GGGATGTCAATATAATTATGAATAGAGT 21534
| | |||||| ||||||| || ||||
Sbjct 370653 CGTGTATCAATAAAATTATGCATCGAGT 370680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425528986492016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |