Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_020871.1 Length=133057 Score E Sequences producing significant alignments: (Bits) Value seq2441 107 2e-18 >seq2441 Length=2995558 Score = 107 bits (118), Expect = 2e-18 Identities = 259/388 (67%), Gaps = 8/388 (2%) Strand=Plus/Plus Query 21151 ATTAATGTGCCTTAAAATTATAGATTGGTTTAACAATGAAGTCAATAT--CAACCGTATC 21208 |||||| || |||| ||| | || ||||| || || | ||| || || | ||||| Sbjct 370297 ATTAATTGGCTTTAATATTCAATATAGGTTTTAC--TGTATCCAAAATTACAGCGGTATC 370354 Query 21209 TGTAATGTTCTCTATGATACTCTCTTTCTTTTTATAGGCAAACGGTGCCTCGTCTAGTGT 21268 | |||| || || || | ||| | ||| || || | || | || || ||||| Sbjct 370355 TTTAATAGCTTCCATAATCACATTTTTATCTTTGTATGCCATAGGCGATTCATCCAGTGT 370414 Query 21269 AGACTCCAACACAGAGGAAGACCAAACATCTTTCATTGTATTCTTAAAATCTTCCATTTC 21328 ||| || | || |||| ||| ||| ||| ||| ||| |||| || | ||| || Sbjct 370415 AGATTCGCATACGGAGGTAGAATAAATTCCTTCCATCTCATTTCTAAATTCATTCATATC 370474 Query 21329 TAGTGTTTCTTTA--GCTTTAGAACGAGACAGTACCCTACCTGCCCCGTGAGGTGCTGAA 21386 || || ||| | |||| | ||| | ||||| || |||||||| || || || ||| Sbjct 370475 AAGGGT--CTTAAATGCTTGATTACGTGCCAGTATTCTTCCTGCCCCATGTGGAGCCGAA 370532 Query 21387 TTGTTCCAGTCTTCGTTTCCCTTTCCTGTGGCAATGATGCTACCATCACGCATATTTAGT 21446 ||||||||||| || | |||||| | ||| | |||||| |||||||| | Sbjct 370533 CAGTTCCAGTCTTTATTGCTTTTTCCTTCGCAAATCAACAAACCATCGCGCATATTGAAA 370592 Query 21447 GGGATAACTAGCTGTTTTCCTTTAGAGGCATCTGTCGCACCTTTACGAATAACCTTATTA 21506 ||||||| | || || || ||| | ||| | | |||||||| ||||||| | | | Sbjct 370593 GGGATAATCATCTTTTCACCCTTATAAGCACGTATAGCACCTTTTCGAATAATCCAGTCA 370652 Query 21507 GGGATGTCAATATAATTATGAATAGAGT 21534 | | |||||| ||||||| || |||| Sbjct 370653 CGTGTATCAATAAAATTATGCATCGAGT 370680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425528986492016