Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq1604 87.8 2e-12 seq1974 82.4 9e-11 seq1094 82.4 9e-11 >seq1604 Length=351056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 150851 GGTCCAGTAGCTCAGC-GGAAAGAGCAACTGCCTTCTAAGCAGTTGGCCATAGGTTCAAA 150909 |||||||||||||||| ||| ||||||||||||||||||||||| || | |||||| || Sbjct 255411 GGTCCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAA 255352 Query 150910 TCCTATCTGGATC 150922 |||| ||||||| Sbjct 255351 TCCTGACTGGATC 255339 >seq1974 Length=137658 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 6713 GCATGGCGGAATCGGTAGACGCATCGGACTTAAAATCCGCTGAGGTAACTCGTGGGGGTT 6772 |||||||||||||||||||||| | || |||| | || || || |||||||||||||| Sbjct 81061 GCATGGCGGAATCGGTAGACGCGTTGGTCTTAGGAACCAATGGGGAAACTCGTGGGGGTT 81120 Query 6773 CAAGTCCCCCTGC 6785 |||||||| |||| Sbjct 81121 CAAGTCCCTCTGC 81133 >seq1094 Length=2708314 Score = 82.4 bits (90), Expect = 9e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 150849 ATGGTCCAGTAGCTCAGC-GGAAAGAGCAACTGCCTTCTAAGCAGTTGGCCATAGGTTCA 150907 |||||||||||||||||| ||| |||||||| ||||||||| || || || |||||| Sbjct 606435 ATGGTCCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGGGTCACAGGTTCG 606494 Query 150908 AATCCTATCTGGATC 150922 |||||| |||||||| Sbjct 606495 AATCCTGTCTGGATC 606509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584653959571520