Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq3213 111 2e-19 seq1690 102 9e-17 seq5996 96.9 4e-15 seq3885 96.9 4e-15 seq1991 93.3 5e-14 seq9935 89.7 6e-13 seq3496 89.7 6e-13 seq1601 89.7 6e-13 seq1971 86.0 7e-12 seq385 86.0 7e-12 seq3436 84.2 3e-11 seq2441 84.2 3e-11 seq1924 82.4 9e-11 seq1604 82.4 9e-11 >seq3213 Length=2170589 Score = 111 bits (122), Expect = 2e-19 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| | Sbjct 229518 TGGAGGATAGGAGAATCGAACTCCTCACCCCCTGCGTGCAAAGCAGGTGCTCTACCAAAT 229459 Query 35882 GAGCTAATTCCCCA 35895 |||||||| ||||| Sbjct 229458 GAGCTAATCCCCCA 229445 >seq1690 Length=1574822 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 |||||| ||||||| ||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct 1439784 TGGAGATTAGGAGAGTCGAACTCCTGACATCCTGCTTGCAAGGCAGGTGCTCTACCAACT 1439843 Query 35882 GAGCTAATTCCCCA 35895 ||||||| |||||| Sbjct 1439844 GAGCTAAATCCCCA 1439857 >seq5996 Length=10664 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/75 (89%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA--CCAA 35879 ||||||||| | ||||||||| | ||||||||||||||||| |||||||||||| |||| Sbjct 3339 TGGAGAATAAGGGACTCGAACCCTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAAGCCAA 3280 Query 35880 CTGAGCTAATTCCCC 35894 |||||||||| |||| Sbjct 3279 CTGAGCTAATCCCCC 3265 >seq3885 Length=21154 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/75 (89%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA--CCAA 35879 ||||||||| | ||||||||| | ||||||||||||||||| |||||||||||| |||| Sbjct 4018 TGGAGAATAAGGGACTCGAACCCTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAAGCCAA 3959 Query 35880 CTGAGCTAATTCCCC 35894 |||||||||| |||| Sbjct 3958 CTGAGCTAATCCCCC 3944 >seq1991 Length=147557 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| Sbjct 145114 TGGAGAATATCGGAGTCGAACCGATGACCCCCTGCTTGCAAAGCAGGTGCTCTAGCCAAC 145173 Query 35881 TGAGCTAATTCCCCAAGG 35898 |||||||||||||| ||| Sbjct 145174 TGAGCTAATTCCCCGAGG 145191 >seq9935 Length=12840 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 |||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| || Sbjct 5952 TGGAGATGAGGAGGATCGAACTCCTGACCCCCTGCGTGCAAGGCAGGTGCTCTCCCAGCT 6011 Query 35882 GAGCTAATTCCCCA 35895 |||||| ||||| Sbjct 6012 GAGCTACACCCCCA 6025 >seq3496 Length=15201 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| Sbjct 7625 TGGAGAATATCGGAGTCGAACCGATGACCCCCTGCTTGCAAAGCAGGTGCTCTAGCCAAC 7684 Query 35881 TGAGCTAATTCCCC 35894 |||||||||||||| Sbjct 7685 TGAGCTAATTCCCC 7698 >seq1601 Length=193913 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 |||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| || Sbjct 146909 TGGAGATGAGGAGGTTCGAACTCCTGACCCCCTGCGTGCAAGGCAGGTGCTCTCCCAGCT 146850 Query 35882 GAGCTAATTCCCCA 35895 |||||| ||||| Sbjct 146849 GAGCTACACCCCCA 146836 >seq1971 Length=148721 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/112 (79%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| | Sbjct 104833 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 104892 Query 35881 TGAGCTAATTCCCC----AAGGAGCCCCTGACAAGATTTGAACTTGCGACCT 35928 ||||||||| |||| | | || ||| | | ||| ||||||| |||||| Sbjct 104893 TGAGCTAATCCCCCTCTTAGGTAGTCCCAGGC-AGAGTTGAACTGCCGACCT 104943 >seq385 Length=1145925 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| | || |||||| | ||||| ||||||||||| ||||| |||||| ||| | Sbjct 504651 TGGAGAATAAGGGAGTCGAACCCTTGACCTCCTGCGTGCAAGGCAGGCGCTCTAGCCAGC 504592 Query 35881 TGAGCTAATTCCCC 35894 |||||||||||||| Sbjct 504591 TGAGCTAATTCCCC 504578 >seq3436 Length=2346199 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| | Sbjct 1073425 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 1073366 Query 35881 TGAGCTAATTCCCCAA 35896 ||||||||| |||||| Sbjct 1073365 TGAGCTAATCCCCCAA 1073350 >seq2441 Length=2995558 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| | Sbjct 256252 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 256311 Query 35881 TGAGCTAATTCCCCAA 35896 ||||||||| |||||| Sbjct 256312 TGAGCTAATCCCCCAA 256327 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| | Sbjct 1377690 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 1377749 Query 35881 TGAGCTAATTCCCCAA 35896 ||||||||| |||||| Sbjct 1377750 TGAGCTAATCCCCCAA 1377765 >seq1924 Length=441942 Score = 82.4 bits (90), Expect = 9e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| | Sbjct 335634 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 335693 Query 35881 TGAGCTAATTCCCCA 35895 ||||||||| ||||| Sbjct 335694 TGAGCTAATCCCCCA 335708 >seq1604 Length=351056 Score = 82.4 bits (90), Expect = 9e-11 Identities = 55/60 (92%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 71421 AGGAATCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC-GCTGAGCTACTG 71479 |||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 255348 AGGATTCGAACCTGAGACCTACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTACTG 255407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571877120341440