Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq3213 111 2e-19
seq1690 102 9e-17
seq5996 96.9 4e-15
seq3885 96.9 4e-15
seq1991 93.3 5e-14
seq9935 89.7 6e-13
seq3496 89.7 6e-13
seq1601 89.7 6e-13
seq1971 86.0 7e-12
seq385 86.0 7e-12
seq3436 84.2 3e-11
seq2441 84.2 3e-11
seq1924 82.4 9e-11
seq1604 82.4 9e-11
>seq3213
Length=2170589
Score = 111 bits (122), Expect = 2e-19
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881
||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 229518 TGGAGGATAGGAGAATCGAACTCCTCACCCCCTGCGTGCAAAGCAGGTGCTCTACCAAAT 229459
Query 35882 GAGCTAATTCCCCA 35895
|||||||| |||||
Sbjct 229458 GAGCTAATCCCCCA 229445
>seq1690
Length=1574822
Score = 102 bits (112), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881
|||||| ||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1439784 TGGAGATTAGGAGAGTCGAACTCCTGACATCCTGCTTGCAAGGCAGGTGCTCTACCAACT 1439843
Query 35882 GAGCTAATTCCCCA 35895
||||||| ||||||
Sbjct 1439844 GAGCTAAATCCCCA 1439857
>seq5996
Length=10664
Score = 96.9 bits (106), Expect = 4e-15
Identities = 67/75 (89%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA--CCAA 35879
||||||||| | ||||||||| | ||||||||||||||||| |||||||||||| ||||
Sbjct 3339 TGGAGAATAAGGGACTCGAACCCTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAAGCCAA 3280
Query 35880 CTGAGCTAATTCCCC 35894
|||||||||| ||||
Sbjct 3279 CTGAGCTAATCCCCC 3265
>seq3885
Length=21154
Score = 96.9 bits (106), Expect = 4e-15
Identities = 67/75 (89%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA--CCAA 35879
||||||||| | ||||||||| | ||||||||||||||||| |||||||||||| ||||
Sbjct 4018 TGGAGAATAAGGGACTCGAACCCTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAAGCCAA 3959
Query 35880 CTGAGCTAATTCCCC 35894
|||||||||| ||||
Sbjct 3958 CTGAGCTAATCCCCC 3944
>seq1991
Length=147557
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| || |||||| ||||||||||| |||||||||||||||||| |||||
Sbjct 145114 TGGAGAATATCGGAGTCGAACCGATGACCCCCTGCTTGCAAAGCAGGTGCTCTAGCCAAC 145173
Query 35881 TGAGCTAATTCCCCAAGG 35898
|||||||||||||| |||
Sbjct 145174 TGAGCTAATTCCCCGAGG 145191
>seq9935
Length=12840
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881
|||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| ||
Sbjct 5952 TGGAGATGAGGAGGATCGAACTCCTGACCCCCTGCGTGCAAGGCAGGTGCTCTCCCAGCT 6011
Query 35882 GAGCTAATTCCCCA 35895
|||||| |||||
Sbjct 6012 GAGCTACACCCCCA 6025
>seq3496
Length=15201
Score = 89.7 bits (98), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| || |||||| ||||||||||| |||||||||||||||||| |||||
Sbjct 7625 TGGAGAATATCGGAGTCGAACCGATGACCCCCTGCTTGCAAAGCAGGTGCTCTAGCCAAC 7684
Query 35881 TGAGCTAATTCCCC 35894
||||||||||||||
Sbjct 7685 TGAGCTAATTCCCC 7698
>seq1601
Length=193913
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881
|||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| ||
Sbjct 146909 TGGAGATGAGGAGGTTCGAACTCCTGACCCCCTGCGTGCAAGGCAGGTGCTCTCCCAGCT 146850
Query 35882 GAGCTAATTCCCCA 35895
|||||| |||||
Sbjct 146849 GAGCTACACCCCCA 146836
>seq1971
Length=148721
Score = 86.0 bits (94), Expect = 7e-12
Identities = 88/112 (79%), Gaps = 6/112 (5%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct 104833 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 104892
Query 35881 TGAGCTAATTCCCC----AAGGAGCCCCTGACAAGATTTGAACTTGCGACCT 35928
||||||||| |||| | | || ||| | | ||| ||||||| ||||||
Sbjct 104893 TGAGCTAATCCCCCTCTTAGGTAGTCCCAGGC-AGAGTTGAACTGCCGACCT 104943
>seq385
Length=1145925
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| | || |||||| | ||||| ||||||||||| ||||| |||||| ||| |
Sbjct 504651 TGGAGAATAAGGGAGTCGAACCCTTGACCTCCTGCGTGCAAGGCAGGCGCTCTAGCCAGC 504592
Query 35881 TGAGCTAATTCCCC 35894
||||||||||||||
Sbjct 504591 TGAGCTAATTCCCC 504578
>seq3436
Length=2346199
Score = 84.2 bits (92), Expect = 3e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct 1073425 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 1073366
Query 35881 TGAGCTAATTCCCCAA 35896
||||||||| ||||||
Sbjct 1073365 TGAGCTAATCCCCCAA 1073350
>seq2441
Length=2995558
Score = 84.2 bits (92), Expect = 3e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct 256252 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 256311
Query 35881 TGAGCTAATTCCCCAA 35896
||||||||| ||||||
Sbjct 256312 TGAGCTAATCCCCCAA 256327
Score = 84.2 bits (92), Expect = 3e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct 1377690 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 1377749
Query 35881 TGAGCTAATTCCCCAA 35896
||||||||| ||||||
Sbjct 1377750 TGAGCTAATCCCCCAA 1377765
>seq1924
Length=441942
Score = 82.4 bits (90), Expect = 9e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880
||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct 335634 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 335693
Query 35881 TGAGCTAATTCCCCA 35895
||||||||| |||||
Sbjct 335694 TGAGCTAATCCCCCA 335708
>seq1604
Length=351056
Score = 82.4 bits (90), Expect = 9e-11
Identities = 55/60 (92%), Gaps = 1/60 (2%)
Strand=Plus/Plus
Query 71421 AGGAATCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC-GCTGAGCTACTG 71479
|||| |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 255348 AGGATTCGAACCTGAGACCTACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTACTG 255407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571877120341440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |