Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq242 152 9e-32
seq783 136 7e-27
seq39 136 7e-27
seq2315 131 3e-25
seq1551 118 2e-21
seq3439 105 1e-17
seq123 95.1 2e-14
seq1206 93.3 8e-14
>seq242
Length=1788442
Score = 152 bits (168), Expect = 9e-32
Identities = 144/184 (78%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||||||||| || || | |||| ||| |||| || ||||| |||||||| |||||
Sbjct 1569959 AATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAATCAATCT 1569900
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||||||||||||||| || ||||| || ||||| ||||||| ||| | |||| ||||||
Sbjct 1569899 CTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGT 1569840
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357
||| || | ||||| || || || || |||||||| |||| ||||| || ||||| ||
Sbjct 1569839 ATCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGAATATCTG 1569780
Query 193358 catt 193361
||||
Sbjct 1569779 CATT 1569776
>seq783
Length=580412
Score = 136 bits (150), Expect = 7e-27
Identities = 176/239 (74%), Gaps = 3/239 (1%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
||||| ||||| || | |||||| || || |||||||| || ||||| |||||||||
Sbjct 387239 ATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGATTAATCTC 387180
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| || ||||| ||||| ||||| ||||| || || | || | || ||| |||
Sbjct 387179 TGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCTCAATGGTA 387120
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgc 193358
|| |||| ||||||||||| || |||||||| ||||| || || || || || || |||
Sbjct 387119 TCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGAAAATCTGC 387060
Query 193359 attttattagtaaaataattattttaaata-atata-tactttatattttaacattata 193415
|| | || | ||| || || | || || || || ||| | || |||| |||| |||
Sbjct 387059 ATCCTGTTTGAAAATTACGTAAATGAATTAGATTTAGTACGTAAT-TTTTTACATGATA 387002
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||| | | ||| | || ||||| | ||||| ||||| ||| || ||||||
Sbjct 390130 ATTCCACCACGAAGTCGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCG 390071
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | |||| ||| || | || || |||||||| || ||||||||||| || ||
Sbjct 390070 GACAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGG 390011
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || |||| ||| | |||| || || || || | ||||
Sbjct 390010 GGAATGCCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCA 389951
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361
||||||||||| || ||||| || || || || || ||||| || ||||||
Sbjct 389950 ACTTCTAGAGTGATGGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 389900
Score = 123 bits (136), Expect = 4e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || || || ||||| | ||||| ||||| ||| || || ||
Sbjct 390358 ATACCACCACGAAGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCT 390299
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | |||| || || | || || || ||||| || ||||||||||| || ||
Sbjct 390298 GAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGG 390239
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || ||||||| ||| | ||| || ||||| |||| |||
Sbjct 390238 GGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCG 390179
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361
||||| | ||| |||||||| || || || ||||||||||| || ||||||
Sbjct 390178 ACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCATT 390128
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
|||||| ||||| || | || || ||| |||| || || || ||||| || |||||
Sbjct 390539 AATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGATCAATCT 390480
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
|||||| || || || || ||||| || || || || |||| ||| | ||| || ||
Sbjct 390479 CTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTTCGATCGT 390420
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357
|| |||| ||| ||||| | ||| || |||||||| || || ||||| || || || ||
Sbjct 390419 GTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGAAAATCTG 390360
Query 193358 cat 193360
|||
Sbjct 390359 CAT 390357
>seq39
Length=3240425
Score = 136 bits (150), Expect = 7e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 2297 CTCACATCTGAGGAAGTTGCATTATCGTTATAATATTTTATTAATTCTTTGGATTTATCT 2356
|||||||||||| | | || || |||||||| || || | || |||| || |||
Sbjct 2060249 CTCACATCTGAGCTACCTAATTTTTCTTTATAATACTTGATAAGTTGTTTGCTGTTTTCT 2060308
Query 2357 AATCTAATCCAGTTATCAAATCGTTTACCACCGTCTTTG-CATAACTTAGTAGCATTAAA 2415
|||| |||||||| |||||||||||| || || || ||||| ||||||||||||||
Sbjct 2060309 AATCGCATCCAGTTTCTAAATCGTTTACCGCC-ACTATGACATAATTTAGTAGCATTAAA 2060367
Query 2416 ATATCCAGTGTTTTTATCTATTATAAGTTTAAAATCACCGAATAATCCATAATAAAATGA 2475
| ||||||| |||||||| | | |||||||| || || | ||||| || |
Sbjct 2060368 ACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATACTG 2060427
Query 2476 GTCTTTAATCTGTTCGTAACATATATCGTTTAGAGACAT 2514
|||||| || ||||| ||||||| || ||| ||||||||
Sbjct 2060428 GTCTTTGATTTGTTCATAACATACATTGTTGAGAGACAT 2060466
Score = 123 bits (136), Expect = 4e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 278678 AACGATATATGTTACGAACAGATTAAAGACTCATTTTATTATGGATTATTCGGTGATTTT 278737
||| || ||||||| ||||| || |||||| | || ||||| | || || ||||||
Sbjct 2060457 AACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTCTCTTTGGAGATTTT 2060398
Query 278738 AAACTTATAATAGATAAAAACACTGGATATTTTAATGCTACTAAGTTATG-CAAAGACGG 278796
|| | | |||||||| ||||||| ||||||||||||||| ||||| || || ||
Sbjct 2060397 AATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAATTATGTCATAGT-GG 2060339
Query 278797 TGGTAAACGATTTGATAACTGGATTAGATTAGATAAATCCAAAGAATTAATAAAATATTA 278856
|||||||||||| |||||||| ||||||| || |||| || | || || |||||
Sbjct 2060338 CGGTAAACGATTTAGAAACTGGATGCGATTAGAAAACAGCAAACAACTTATCAAGTATTA 2060279
Query 278857 TAACGATAATGCAACTTCCTCAGATGTGAG 278886
||| || || | | ||||||||||||
Sbjct 2060278 TAAAGAAAAATTAGGTAGCTCAGATGTGAG 2060249
Score = 122 bits (134), Expect = 2e-22
Identities = 262/381 (69%), Gaps = 22/381 (6%)
Strand=Plus/Plus
Query 6572 ATTATTTTATTGCACTTTTTATAGAAATCAGTAGAAATCCAAGTAGATATCGACAATAAT 6631
|| || | || |||||| | ||| ||||| | |||||||| || | || | | |||
Sbjct 2060102 ATAATGTCATAGCACTTATCATAAAAATCTTTTGAAATCCAGGTTGCAAT-GTC--TAAC 2060158
Query 6632 AG-ATCATCGCATA--CGTAAGTGCCCGATATTAATAAATCTAGTTTATTTGTGCCTTTG 6688
|| ||| || ||| | || ||||| |||| | ||||||| || |||||| ||||
Sbjct 2060159 AGTATCTTCTTATAAACATACGTGCCACATATAACTAAATCTTCTTGATTTGTACCTTCA 2060218
Query 6689 GATTCTATAATATACGTGGATTTTTGGTGG-TCAGAATTCGGGCTACCAAAATCTTTATC 6747
|| | | || |||| | |||||| || ||| | | | |||||| || | || |
Sbjct 2060219 GACTGAACAACATACATCATATTTTGGGGGCTCACATCT-GAGCTACCTAATTTTTCTTT 2060277
Query 6748 AAAACACTCTATTAATTCTTTAGATCTATCGTTCTCTAA------CCATTTTTTAAATCG 6801
| || ||| || | || ||| || ||| ||||| ||| ||| |||||||
Sbjct 2060278 ATAATACTTGATAAGTTGTTTG---CT---GTTTTCTAATCGCATCCAGTTTCTAAATCG 2060331
Query 6802 CTTACCTCCGTCTTTG-CATAGCTTAGTAGCATTAAAATATCCAGTGTTTTTATCTATAA 6860
||||| || || || |||| ||||||||||||||| ||||||| ||||||||||
Sbjct 2060332 TTTACCGCCA-CTATGACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAA 2060390
Query 6861 TTAATTTAAAATCACCGAATAATCCATAATAAAATGAGTCTTTAATCTGTTCGTAACATA 6920
|| |||||||| || || | ||||| || | |||||| || ||||| |||||||
Sbjct 2060391 CCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATA 2060450
Query 6921 TGTCGTTTAAAGACATGATTT 6941
| ||| | ||||||| |||
Sbjct 2060451 CATTGTTGAGAGACATGTTTT 2060471
Score = 122 bits (134), Expect = 2e-22
Identities = 262/381 (69%), Gaps = 22/381 (6%)
Strand=Plus/Minus
Query 274242 AAATCATGTCTTTAAACGACATATGTTACGAACAGATTAAAGACTCATTTTATTATGGAT 274301
||| ||||||| | ||| | ||||||| ||||| || |||||| | || |||||
Sbjct 2060471 AAAACATGTCTCTCAACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTC 2060412
Query 274302 TATTCGGTGATTTTAAATTAATTATAGATAAAAACACTGGATATTTTAATGCTACTAAGC 274361
| || || |||||||| || |||||||||| ||||||| |||||||||||||||
Sbjct 2060411 TCTTTGGAGATTTTAATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAAT 2060352
Query 274362 TATG-CAAAGACGGAGGTAAGCGATTTAAAAAATGG------TTAGAGAACGATAGATCT 274414
|||| || || || ||||| ||||||| ||| ||| ||||| ||| ||
Sbjct 2060351 TATGTCATAG-TGGCGGTAAACGATTTAGAAACTGGATGCGATTAGAAAAC---AG---C 2060299
Query 274415 AAAGAATTAATAGAGTGTTTTGATAAAGATTTTGGTAGCCCGAATTCTGA-CCACCAAAA 274473
||| || | || ||| || | | || | || |||||| | | | ||| || ||||||
Sbjct 2060298 AAACAACTTATCAAGTATTATAAAGAAAAATTAGGTAGCTC-AGATGTGAGCCCCCAAAA 2060240
Query 274474 ATCCACGTATATTATAGAATCCAAAGGCACAAATAAACTAGATTTATTAATATCGGGCAC 274533
| |||| || | | || |||| |||||| || ||||||| | |||| |||||
Sbjct 2060239 TATGATGTATGTTGTTCAGTCTGAAGGTACAAATCAAGAAGATTTAGTTATATGTGGCAC 2060180
Query 274534 TTACG--TATGCGATGAT-CTATTATTGTCGATATCTACTTGGATTTCTACTGATTTCTA 274590
|| | ||| || ||| || ||| | | || | || |||||||| | ||||| ||
Sbjct 2060179 GTATGTTTATAAGAAGATACTGTTA--GAC-ATTGCAACCTGGATTTCAAAAGATTTTTA 2060123
Query 274591 TAAAAAGTGCAATAAAATAAT 274611
| | |||||| || | || ||
Sbjct 2060122 TGATAAGTGCTATGACATTAT 2060102
Score = 109 bits (120), Expect = 1e-18
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 192538 TCTAGTTTCATCCAATCTTTAAATCTTTTACCTCCTAAATTACATAATTTAGTAGCATTA 192597
|||| | |||||| | | |||||| |||||| || || |||||||||||||||||||
Sbjct 2060306 TCTAATCGCATCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCATTA 2060365
Query 192598 AAATAACCAGTATTTTTATCTATTACGAGTTTAAAATCACCGAATAATCCATAATAAAAA 192657
||| | ||||| |||||||| || | |||||||| || || | ||||| || |
Sbjct 2060366 AAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATAC 2060425
Query 192658 GAGTCTTTGATGTGTTCGTAACAAATATCGTTAAGAGA 192695
||||||||| ||||| ||||| | || ||| |||||
Sbjct 2060426 TGGTCTTTGATTTGTTCATAACATACATTGTTGAGAGA 2060463
Score = 98.7 bits (108), Expect = 2e-15
Identities = 136/188 (72%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 221209 tttttttaatatattcgattaaatcttttgat-ttttctaatgatttccaatgtttaaat 221267
||| |||| ||| | ||| || | |||| | ||||||||| |||| | | |||||
Sbjct 2060271 TTTCTTTATAATACTTGAT-AAGTTGTTTGCTGTTTTCTAATCGCATCCAGTTTCTAAAT 2060329
Query 221268 tttttaCCACCGAGATTACATAATTTAGTAGCATTGAAACATCCGGTGTTCTTATCTATT 221327
|||||| || || |||||||||||||||||| |||||||| || |||||||||
Sbjct 2060330 CGTTTACCGCCACTATGACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATA 2060389
Query 221328 ACTAGTTTAAAATCACCGAATAATCCGTAATAAAATGTATCTTTTATATGTTCGTAACAT 221387
|| | |||||||| || || | || || || | ||||| || ||||| ||||||
Sbjct 2060390 ACCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACAT 2060449
Query 221388 ATATCGTT 221395
| || |||
Sbjct 2060450 ACATTGTT 2060457
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 148963 TTTTCTAAACGATTCCATTGTTTAAATTGTTTACCACCAAGATTGCATAATTTAGTTGCG 149022
|||||||| || |||| | | ||||| ||||||| ||| || ||||||||||| ||
Sbjct 2060303 TTTTCTAATCGCATCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCA 2060362
Query 149023 TTAAAACAACCGGTATTTTTATCGATTATTAGTTTAAAATCACCAAATAATCCATAATAA 149082
|||||||| || || ||||| || | | |||||||| ||||| | ||||| ||
Sbjct 2060363 TTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAA 2060422
Query 149083 AATGAGTCTTTAATCTGTTCGTAGCATACGTCGTT 149117
| |||||| || ||||| || ||||| | |||
Sbjct 2060423 TACTGGTCTTTGATTTGTTCATAACATACATTGTT 2060457
Score = 87.8 bits (96), Expect = 3e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 48754 TCTCTGAACGACATATGCTACGAAGAGATAAAGGACTCGTTCCACCATGGCCTCTTCGGA 48813
||||| ||| | |||| || ||| | || || ||| || |||| ||||| |||
Sbjct 2060463 TCTCTCAACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTCTCTTTGGA 2060404
Query 48814 GATTTTAAACTAGTAATAGATAAGAACACCGGATGTTTCAATGCTACTAAATTATGTAAT 48873
|||||||| | || ||||||||| || |||||||| |||||||||||||||||| ||
Sbjct 2060403 GATTTTAATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAATTATGTCAT 2060344
Query 48874 CTCGGTGGTAAAAAATTT 48891
|| |||||| ||||
Sbjct 2060343 AGTGGCGGTAAACGATTT 2060326
>seq2315
Length=138946
Score = 131 bits (144), Expect = 3e-25
Identities = 146/194 (75%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 193167 GCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCA 193226
|||| ||| || |||| ||||| || | || | | ||| || || ||||| || |||
Sbjct 28213 GCCTTTTTGGA--TATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCA 28156
Query 193227 AAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATA 193286
|||||||||| ||| ||||| || || ||||||||||| ||||| ||||| | |||| |
Sbjct 28155 AAAATTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACA 28096
Query 193287 TTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGttttt 193346
||| ||| ||||| || | || || || || || || ||||| ||||| || || ||
Sbjct 28095 TTTTCAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTC 28036
Query 193347 acaaatatttgcat 193360
|||||||| |||||
Sbjct 28035 ACAAATATCTGCAT 28022
Score = 127 bits (140), Expect = 4e-24
Identities = 138/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
|||||| ||||| || | || | | ||| || || ||||| || |||||||||||||
Sbjct 27702 AATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATTAATCG 27643
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| ||||| || || ||||||||||| ||||| || || | |||| |||| ||| ||
Sbjct 27642 CTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 27583
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357
||| || | || || || || || || ||||| ||||| || || || |||||||| ||
Sbjct 27582 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 27523
Query 193358 cat 193360
|||
Sbjct 27522 CAT 27520
Score = 123 bits (136), Expect = 4e-23
Identities = 137/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| |||||||| || | || | ||| || | ||||| || || ||||| |||||
Sbjct 26960 AATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAATCAATCT 26901
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| ||||||||||| || || ||||| ||||| ||||| | ||||| ||| ||| ||
Sbjct 26900 CTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCTCAATGGT 26841
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357
||| || | || || || || ||||| |||||||| || || ||||| ||||| || ||
Sbjct 26840 ATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAAAAATCTG 26781
Query 193358 cat 193360
|||
Sbjct 26780 CAT 26778
Score = 123 bits (136), Expect = 4e-23
Identities = 137/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
|||||| ||||| || | || | ||| || || |||||||| |||||||||||||
Sbjct 29143 AATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATTAATCG 29084
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| || || || || ||||||||||| ||||| || || | |||| |||| ||| ||
Sbjct 29083 CTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 29024
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357
||| || | || || || || || || ||||| ||||| || || || |||||||| ||
Sbjct 29023 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 28964
Query 193358 cat 193360
|||
Sbjct 28963 CAT 28961
Score = 98.7 bits (108), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| || || ||||| || | ||| || ||||||||||| || ||||| || ||||||||
Sbjct 27276 TGCTTACCAGCAAAGATAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATC 27217
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|| | ||||| |||| ||| ||||| || | || ||||| | || |||||||| ||
Sbjct 27216 TTTGCTTTTACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCA 27157
Query 193335 GTTAGCGtttttacaaatatttgcatt 193361
|| | || || || || |||||||||
Sbjct 27156 GTCAAAGTCTTAACGAAGATTTGCATT 27130
>seq1551
Length=444118
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||| || | |||||||| | ||| | ||||| |||||| |||||
Sbjct 25338 ATACCACCTCTCAACCGGAAAACCAGATGAAGTGTGGATTCTTTCTGAATATTGTAGTCT 25397
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || ||||| ||| || | || || |||||||| || ||||||||||| || |||
Sbjct 25398 GACAATGTTCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGA 25457
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || ||||||| ||| | ||| ||| || || |||| |||
Sbjct 25458 GGAATGCCTTCCTTGCTCTGAATTTTGGATTTAACGTTTTTAATCGTGTCTGAAGCCTCG 25517
Query 193311 ACTTC 193315
|||||
Sbjct 25518 ACTTC 25522
>seq3439
Length=31086
Score = 105 bits (116), Expect = 1e-17
Identities = 120/161 (75%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 2354 TCTAATCTAATCCAGTTATCAAATCGTTTACCACCGTCTTTGCATAACTTAGTAGCATTA 2413
|| ||||| | ||| |||||||| ||||| ||| | | |||| ||| ||||||||
Sbjct 10451 TCCAATCTTAGCCAATTATCAAAACGTTTTTTACCAGCCTGACATAGCTTCGTAGCATTG 10510
Query 2414 AAATATCCAGTGTTTTTATCTATTATAAGTTTAAAATCACCGAATAATCCATAATAAAAT 2473
|| |||||||| ||||||||| | ||||||||||| || || | ||||| | ||
Sbjct 10511 AAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCATACCAGTAT 10570
Query 2474 GAGTCTTTAATCTGTTCGTAACATATATCGTTTAGAGACAT 2514
||||| || ||||| ||||||| |||||| ||||| ||
Sbjct 10571 TGATCTTTGATTTGTTCATAACATACATCGTTAAGAGATAT 10611
Score = 98.7 bits (108), Expect = 2e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 278678 AACGATATATGTTACGAACAGATTAAAGACTCATTTTATTATGGATTATTCGGTGATTTT 278737
|||||| ||||||| ||||| || ||||| || | ||||| | || || ||||||
Sbjct 10602 AACGATGTATGTTATGAACAAATCAAAGATCAATACTGGTATGGTCTCTTTGGAGATTTT 10543
Query 278738 AAACTTATAATAGATAAAAACACTGGATATTTTAATGCTACTAAGTTATGCAAAGACGGT 278797
||||| | ||||||||| |||||||| || |||||||| ||| |||| | | |||
Sbjct 10542 AAACTGGTCATAGATAAATCTACTGGATACTTCAATGCTACGAAGCTATGTCAGGCTGGT 10483
Query 278798 GGTAAACGATTTGATAACTGGATTAGATTAGA 278829
||||| |||||||| ||| | ||||| ||
Sbjct 10482 AAAAAACGTTTTGATAATTGGCTAAGATTGGA 10451
Score = 89.7 bits (98), Expect = 9e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 192579 ACATAATTTAGTAGCATTAAAATAACCAGTATTTTTATCTATTACGAGTTTAAAATCACC 192638
||||| || |||||||| || || |||||| ||||||||| || ||||||||||| ||
Sbjct 10492 ACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCC 10551
Query 192639 GAATAATCCATAATAAAAAGAGTCTTTGATGTGTTCGTAACAAATATCGTTAAGAGA 192695
|| | ||||| | | |||||||| ||||| ||||| | ||||||||||||
Sbjct 10552 AAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACATACATCGTTAAGAGA 10608
Score = 87.8 bits (96), Expect = 3e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 150072 TTCCAATCGCTTCCAATTAAAATAATCTTTATTTCCTAATTTACATAATTTTGTAGCGTT 150131
|||||||| ||||||| | || ||| || || | ||||| || ||||| ||
Sbjct 10450 TTCCAATCTTAGCCAATTATCAAAACGTTTTTTACCAGCCTGACATAGCTTCGTAGCATT 10509
Query 150132 AAAGCATCCGGTATTTTTATCTATTACTAGTTTAAAATCACCGAATAATCCGTAATAAAA 150191
||| |||| ||| ||||||||| || ||||||||||| || || | || || | |
Sbjct 10510 GAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCATACCAGTA 10569
Query 150192 TGTATCTTTGATATGTTCGTAACATATATCGTT 150224
| ||||||||| ||||| ||||||| ||||||
Sbjct 10570 TTGATCTTTGATTTGTTCATAACATACATCGTT 10602
>seq123
Length=2135277
Score = 95.1 bits (104), Expect = 2e-14
Identities = 144/201 (72%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 2318 TTATCGTTATAATATTTTATTAATTCTTTGGATT-TATCTAATCTAATCCAGTTATCAAA 2376
|| || |||||||| || ||||||| ||| |||| | | | || || | | | |||
Sbjct 576775 TTTTCTTTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCAACCAATGAAAGAAA 576834
Query 2377 TCGTTTACCACCGTCTTTGCATAACTTAGTAGCATTAAAATATCCAGTGTTTTTATCTAT 2436
| ||| ||||| ||||| ||||||||||| || || ||||||||||| |||||||||
Sbjct 576835 TTCTTT-CCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTAT 576893
Query 2437 TATAAGTTTAAAATCACCGAATAATCCATAATAAAATGAGTCTTTA---ATCTGTTCGTA 2493
| || || ||||| || || | ||||| | || | |||| || ||||| ||
Sbjct 576894 AACCAGCTTGAAATCTCCAAAGAGACCATACCAGTAT---TGTTTAACGATTTGTTCATA 576950
Query 2494 ACATATATCGTTTAGAGACAT 2514
||||| || || ||||||||
Sbjct 576951 ACATACATTATTCAGAGACAT 576971
Score = 95.1 bits (104), Expect = 2e-14
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 147851 TTAAAATAATTTATTAAATCTTTAGATT-TATCTAATCTAGACCAATTATAAAATTTCTT 147909
||| ||||||| ||||| | ||| |||| | | | || | |||||| | | || |||||
Sbjct 576781 TTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCA-ACCAATGAAAGAAATTCTT 576839
Query 147910 ACCACCATCTTTACATAGCTTGGTAGCGTTAAAATAACCGGTGTTTTTATCTATAATTAA 147969
|||||||||||||||| ||| || ||||| ||||| || || ||||||||||| |
Sbjct 576840 TCCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTATAACCAG 576899
Query 147970 TTTAAAATCACCAAATACACTATA 147993
|| ||||| ||||| | || |||
Sbjct 576900 CTTGAAATCTCCAAAGAGACCATA 576923
Score = 93.3 bits (102), Expect = 8e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 3444 TTTTCATTGTAAAATTCTATTAATTCCTTAGATTTAGAGTTTTCGTACCAATGTTTAAAT 3503
||||| || ||| | | ||||||| || |||| ||| || ||||||| ||
Sbjct 576775 TTTTCTTTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCAACCAATGAAAGAAA 576834
Query 3504 TTCTTTCCTCCGTCTTTACATAACTTAGTAGCATTAAAATATCCAGTGTTTTTATCTATT 3563
|||||||| || ||||||||||||||||| || || ||||||||||| |||||||||
Sbjct 576835 TTCTTTCCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTATA 576894
Query 3564 ATAAGTTTAAAATCACCGAATAATCCATA 3592
| || || ||||| || || | |||||
Sbjct 576895 ACCAGCTTGAAATCTCCAAAGAGACCATA 576923
Score = 93.3 bits (102), Expect = 8e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 277591 TATGGATTATTCGGTGATTTTAAACTTATAATAGATAAAAACACTGGATATTTTAATGCT 277650
||||| | || || ||||| || || | ||||||||| ||||||||||| || ||
Sbjct 576923 TATGGTCTCTTTGGAGATTTCAAGCTGGTTATAGATAAATCTACTGGATATTTCAACGCC 576864
Query 277651 ACTAAGTTATGTAAAGACGGAGGAAAGAAATTTAAACATTGGTACGAAAACTCTAAATCT 277710
||||||||||||||||| || |||||||| || ||||||| || ||| ||||
Sbjct 576863 ACTAAGTTATGTAAAGATGGTGGAAAGAATTTCTTTCATTGGTTGGAGAACAAACAATCA 576804
Query 277711 AAGGAATTAATAGAATTTTACAATGAAAA 277739
|| ||||||| | | ||| || |||||
Sbjct 576803 AAAAAATTAATTAATTATTATAAAGAAAA 576775
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/188 (71%), Gaps = 8/188 (4%)
Strand=Plus/Minus
Query 278682 ATATATGTTACGAACAGAT---TAAAGACTCATTTTATTATGGATTATTCGGTGATTTTA 278738
|| ||||||| ||||| || |||| | || | ||||| | || || ||||| |
Sbjct 576958 ATGTATGTTATGAACAAATCGTTAAACA---ATACTGGTATGGTCTCTTTGGAGATTTCA 576902
Query 278739 AACTTATAATAGATAAAAACACTGGATATTTTAATGCTACTAAGTTATGCAAAGACGGTG 278798
| || | ||||||||| ||||||||||| || || ||||||||||| ||||| ||||
Sbjct 576901 AGCTGGTTATAGATAAATCTACTGGATATTTCAACGCCACTAAGTTATGTAAAGATGGTG 576842
Query 278799 GTAAACGATTTGATAACTGGATTAGATTAGATA-AATCCAAAGAATTAATAAAATATTAT 278857
| ||| |||| | | | || || | | | |||| ||| ||||||| || ||||||
Sbjct 576841 G-AAAGAATTTCTTTCATTGGTTGGAGAACAAACAATCAAAAAAATTAATTAATTATTAT 576783
Query 278858 AACGATAA 278865
|| || ||
Sbjct 576782 AAAGAAAA 576775
>seq1206
Length=549353
Score = 93.3 bits (102), Expect = 8e-14
Identities = 119/161 (74%), Gaps = 5/161 (3%)
Strand=Plus/Minus
Query 192568 CCTCCTAAATTACATAATTTAGTAGCATTAAAATAACCAGTATTTTTATCTATTACGAGT 192627
||||| |||||||||||| |||||||||||| |||||||| |||||||| || ||
Sbjct 366503 CCTCCACTATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGA 366444
Query 192628 TTAAAATCACCGAATAATCCATAATAAAAAGAGTCTTTGATGTGTTCGTAACAAATATCG 192687
||||| | || || | ||||| || | |||||||| |||| ||||| | ||
Sbjct 366443 TTAAATTTTCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAATTA 366384
Query 192688 TTAAGAGAATTCATT--TTA--TTTTTGATTT-TAAATATA 192723
|||||||| | ||| ||| | |||||||| | ||||||
Sbjct 366383 TTAAGAGACATGATTTGTTAAGTGTTTGATTTATTAATATA 366343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899375597101440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |