Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq242 152 9e-32 seq783 136 7e-27 seq39 136 7e-27 seq2315 131 3e-25 seq1551 118 2e-21 seq3439 105 1e-17 seq123 95.1 2e-14 seq1206 93.3 8e-14 >seq242 Length=1788442 Score = 152 bits (168), Expect = 9e-32 Identities = 144/184 (78%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||||||||| || || | |||| ||| |||| || ||||| |||||||| ||||| Sbjct 1569959 AATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAATCAATCT 1569900 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||||||||| || ||||| || ||||| ||||||| ||| | |||| |||||| Sbjct 1569899 CTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGT 1569840 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357 ||| || | ||||| || || || || |||||||| |||| ||||| || ||||| || Sbjct 1569839 ATCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGAATATCTG 1569780 Query 193358 catt 193361 |||| Sbjct 1569779 CATT 1569776 >seq783 Length=580412 Score = 136 bits (150), Expect = 7e-27 Identities = 176/239 (74%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| ||||| || | |||||| || || |||||||| || ||||| ||||||||| Sbjct 387239 ATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGATTAATCTC 387180 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || ||||| ||||| ||||| ||||| || || | || | || ||| ||| Sbjct 387179 TGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCTCAATGGTA 387120 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgc 193358 || |||| ||||||||||| || |||||||| ||||| || || || || || || ||| Sbjct 387119 TCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGAAAATCTGC 387060 Query 193359 attttattagtaaaataattattttaaata-atata-tactttatattttaacattata 193415 || | || | ||| || || | || || || || ||| | || |||| |||| ||| Sbjct 387059 ATCCTGTTTGAAAATTACGTAAATGAATTAGATTTAGTACGTAAT-TTTTTACATGATA 387002 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | | ||| | || ||||| | ||||| ||||| ||| || |||||| Sbjct 390130 ATTCCACCACGAAGTCGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCG 390071 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| ||| || | || || |||||||| || ||||||||||| || || Sbjct 390070 GACAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGG 390011 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || || |||| ||| | |||| || || || || | |||| Sbjct 390010 GGAATGCCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCA 389951 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 ||||||||||| || ||||| || || || || || ||||| || |||||| Sbjct 389950 ACTTCTAGAGTGATGGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 389900 Score = 123 bits (136), Expect = 4e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || || ||||| | ||||| ||||| ||| || || || Sbjct 390358 ATACCACCACGAAGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCT 390299 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| || || | || || || ||||| || ||||||||||| || || Sbjct 390298 GAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGG 390239 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || ||||||| ||| | ||| || ||||| |||| ||| Sbjct 390238 GGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCG 390179 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 ||||| | ||| |||||||| || || || ||||||||||| || |||||| Sbjct 390178 ACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCATT 390128 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| ||||| || | || || ||| |||| || || || ||||| || ||||| Sbjct 390539 AATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGATCAATCT 390480 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 |||||| || || || || ||||| || || || || |||| ||| | ||| || || Sbjct 390479 CTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTTCGATCGT 390420 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357 || |||| ||| ||||| | ||| || |||||||| || || ||||| || || || || Sbjct 390419 GTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGAAAATCTG 390360 Query 193358 cat 193360 ||| Sbjct 390359 CAT 390357 >seq39 Length=3240425 Score = 136 bits (150), Expect = 7e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 2297 CTCACATCTGAGGAAGTTGCATTATCGTTATAATATTTTATTAATTCTTTGGATTTATCT 2356 |||||||||||| | | || || |||||||| || || | || |||| || ||| Sbjct 2060249 CTCACATCTGAGCTACCTAATTTTTCTTTATAATACTTGATAAGTTGTTTGCTGTTTTCT 2060308 Query 2357 AATCTAATCCAGTTATCAAATCGTTTACCACCGTCTTTG-CATAACTTAGTAGCATTAAA 2415 |||| |||||||| |||||||||||| || || || ||||| |||||||||||||| Sbjct 2060309 AATCGCATCCAGTTTCTAAATCGTTTACCGCC-ACTATGACATAATTTAGTAGCATTAAA 2060367 Query 2416 ATATCCAGTGTTTTTATCTATTATAAGTTTAAAATCACCGAATAATCCATAATAAAATGA 2475 | ||||||| |||||||| | | |||||||| || || | ||||| || | Sbjct 2060368 ACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATACTG 2060427 Query 2476 GTCTTTAATCTGTTCGTAACATATATCGTTTAGAGACAT 2514 |||||| || ||||| ||||||| || ||| |||||||| Sbjct 2060428 GTCTTTGATTTGTTCATAACATACATTGTTGAGAGACAT 2060466 Score = 123 bits (136), Expect = 4e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 278678 AACGATATATGTTACGAACAGATTAAAGACTCATTTTATTATGGATTATTCGGTGATTTT 278737 ||| || ||||||| ||||| || |||||| | || ||||| | || || |||||| Sbjct 2060457 AACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTCTCTTTGGAGATTTT 2060398 Query 278738 AAACTTATAATAGATAAAAACACTGGATATTTTAATGCTACTAAGTTATG-CAAAGACGG 278796 || | | |||||||| ||||||| ||||||||||||||| ||||| || || || Sbjct 2060397 AATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAATTATGTCATAGT-GG 2060339 Query 278797 TGGTAAACGATTTGATAACTGGATTAGATTAGATAAATCCAAAGAATTAATAAAATATTA 278856 |||||||||||| |||||||| ||||||| || |||| || | || || ||||| Sbjct 2060338 CGGTAAACGATTTAGAAACTGGATGCGATTAGAAAACAGCAAACAACTTATCAAGTATTA 2060279 Query 278857 TAACGATAATGCAACTTCCTCAGATGTGAG 278886 ||| || || | | |||||||||||| Sbjct 2060278 TAAAGAAAAATTAGGTAGCTCAGATGTGAG 2060249 Score = 122 bits (134), Expect = 2e-22 Identities = 262/381 (69%), Gaps = 22/381 (6%) Strand=Plus/Plus Query 6572 ATTATTTTATTGCACTTTTTATAGAAATCAGTAGAAATCCAAGTAGATATCGACAATAAT 6631 || || | || |||||| | ||| ||||| | |||||||| || | || | | ||| Sbjct 2060102 ATAATGTCATAGCACTTATCATAAAAATCTTTTGAAATCCAGGTTGCAAT-GTC--TAAC 2060158 Query 6632 AG-ATCATCGCATA--CGTAAGTGCCCGATATTAATAAATCTAGTTTATTTGTGCCTTTG 6688 || ||| || ||| | || ||||| |||| | ||||||| || |||||| |||| Sbjct 2060159 AGTATCTTCTTATAAACATACGTGCCACATATAACTAAATCTTCTTGATTTGTACCTTCA 2060218 Query 6689 GATTCTATAATATACGTGGATTTTTGGTGG-TCAGAATTCGGGCTACCAAAATCTTTATC 6747 || | | || |||| | |||||| || ||| | | | |||||| || | || | Sbjct 2060219 GACTGAACAACATACATCATATTTTGGGGGCTCACATCT-GAGCTACCTAATTTTTCTTT 2060277 Query 6748 AAAACACTCTATTAATTCTTTAGATCTATCGTTCTCTAA------CCATTTTTTAAATCG 6801 | || ||| || | || ||| || ||| ||||| ||| ||| ||||||| Sbjct 2060278 ATAATACTTGATAAGTTGTTTG---CT---GTTTTCTAATCGCATCCAGTTTCTAAATCG 2060331 Query 6802 CTTACCTCCGTCTTTG-CATAGCTTAGTAGCATTAAAATATCCAGTGTTTTTATCTATAA 6860 ||||| || || || |||| ||||||||||||||| ||||||| |||||||||| Sbjct 2060332 TTTACCGCCA-CTATGACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAA 2060390 Query 6861 TTAATTTAAAATCACCGAATAATCCATAATAAAATGAGTCTTTAATCTGTTCGTAACATA 6920 || |||||||| || || | ||||| || | |||||| || ||||| ||||||| Sbjct 2060391 CCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATA 2060450 Query 6921 TGTCGTTTAAAGACATGATTT 6941 | ||| | ||||||| ||| Sbjct 2060451 CATTGTTGAGAGACATGTTTT 2060471 Score = 122 bits (134), Expect = 2e-22 Identities = 262/381 (69%), Gaps = 22/381 (6%) Strand=Plus/Minus Query 274242 AAATCATGTCTTTAAACGACATATGTTACGAACAGATTAAAGACTCATTTTATTATGGAT 274301 ||| ||||||| | ||| | ||||||| ||||| || |||||| | || ||||| Sbjct 2060471 AAAACATGTCTCTCAACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTC 2060412 Query 274302 TATTCGGTGATTTTAAATTAATTATAGATAAAAACACTGGATATTTTAATGCTACTAAGC 274361 | || || |||||||| || |||||||||| ||||||| ||||||||||||||| Sbjct 2060411 TCTTTGGAGATTTTAATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAAT 2060352 Query 274362 TATG-CAAAGACGGAGGTAAGCGATTTAAAAAATGG------TTAGAGAACGATAGATCT 274414 |||| || || || ||||| ||||||| ||| ||| ||||| ||| || Sbjct 2060351 TATGTCATAG-TGGCGGTAAACGATTTAGAAACTGGATGCGATTAGAAAAC---AG---C 2060299 Query 274415 AAAGAATTAATAGAGTGTTTTGATAAAGATTTTGGTAGCCCGAATTCTGA-CCACCAAAA 274473 ||| || | || ||| || | | || | || |||||| | | | ||| || |||||| Sbjct 2060298 AAACAACTTATCAAGTATTATAAAGAAAAATTAGGTAGCTC-AGATGTGAGCCCCCAAAA 2060240 Query 274474 ATCCACGTATATTATAGAATCCAAAGGCACAAATAAACTAGATTTATTAATATCGGGCAC 274533 | |||| || | | || |||| |||||| || ||||||| | |||| ||||| Sbjct 2060239 TATGATGTATGTTGTTCAGTCTGAAGGTACAAATCAAGAAGATTTAGTTATATGTGGCAC 2060180 Query 274534 TTACG--TATGCGATGAT-CTATTATTGTCGATATCTACTTGGATTTCTACTGATTTCTA 274590 || | ||| || ||| || ||| | | || | || |||||||| | ||||| || Sbjct 2060179 GTATGTTTATAAGAAGATACTGTTA--GAC-ATTGCAACCTGGATTTCAAAAGATTTTTA 2060123 Query 274591 TAAAAAGTGCAATAAAATAAT 274611 | | |||||| || | || || Sbjct 2060122 TGATAAGTGCTATGACATTAT 2060102 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 192538 TCTAGTTTCATCCAATCTTTAAATCTTTTACCTCCTAAATTACATAATTTAGTAGCATTA 192597 |||| | |||||| | | |||||| |||||| || || ||||||||||||||||||| Sbjct 2060306 TCTAATCGCATCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCATTA 2060365 Query 192598 AAATAACCAGTATTTTTATCTATTACGAGTTTAAAATCACCGAATAATCCATAATAAAAA 192657 ||| | ||||| |||||||| || | |||||||| || || | ||||| || | Sbjct 2060366 AAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATAC 2060425 Query 192658 GAGTCTTTGATGTGTTCGTAACAAATATCGTTAAGAGA 192695 ||||||||| ||||| ||||| | || ||| ||||| Sbjct 2060426 TGGTCTTTGATTTGTTCATAACATACATTGTTGAGAGA 2060463 Score = 98.7 bits (108), Expect = 2e-15 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 221209 tttttttaatatattcgattaaatcttttgat-ttttctaatgatttccaatgtttaaat 221267 ||| |||| ||| | ||| || | |||| | ||||||||| |||| | | ||||| Sbjct 2060271 TTTCTTTATAATACTTGAT-AAGTTGTTTGCTGTTTTCTAATCGCATCCAGTTTCTAAAT 2060329 Query 221268 tttttaCCACCGAGATTACATAATTTAGTAGCATTGAAACATCCGGTGTTCTTATCTATT 221327 |||||| || || |||||||||||||||||| |||||||| || ||||||||| Sbjct 2060330 CGTTTACCGCCACTATGACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATA 2060389 Query 221328 ACTAGTTTAAAATCACCGAATAATCCGTAATAAAATGTATCTTTTATATGTTCGTAACAT 221387 || | |||||||| || || | || || || | ||||| || ||||| |||||| Sbjct 2060390 ACCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACAT 2060449 Query 221388 ATATCGTT 221395 | || ||| Sbjct 2060450 ACATTGTT 2060457 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 148963 TTTTCTAAACGATTCCATTGTTTAAATTGTTTACCACCAAGATTGCATAATTTAGTTGCG 149022 |||||||| || |||| | | ||||| ||||||| ||| || ||||||||||| || Sbjct 2060303 TTTTCTAATCGCATCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCA 2060362 Query 149023 TTAAAACAACCGGTATTTTTATCGATTATTAGTTTAAAATCACCAAATAATCCATAATAA 149082 |||||||| || || ||||| || | | |||||||| ||||| | ||||| || Sbjct 2060363 TTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAA 2060422 Query 149083 AATGAGTCTTTAATCTGTTCGTAGCATACGTCGTT 149117 | |||||| || ||||| || ||||| | ||| Sbjct 2060423 TACTGGTCTTTGATTTGTTCATAACATACATTGTT 2060457 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 48754 TCTCTGAACGACATATGCTACGAAGAGATAAAGGACTCGTTCCACCATGGCCTCTTCGGA 48813 ||||| ||| | |||| || ||| | || || ||| || |||| ||||| ||| Sbjct 2060463 TCTCTCAACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTCTCTTTGGA 2060404 Query 48814 GATTTTAAACTAGTAATAGATAAGAACACCGGATGTTTCAATGCTACTAAATTATGTAAT 48873 |||||||| | || ||||||||| || |||||||| |||||||||||||||||| || Sbjct 2060403 GATTTTAATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAATTATGTCAT 2060344 Query 48874 CTCGGTGGTAAAAAATTT 48891 || |||||| |||| Sbjct 2060343 AGTGGCGGTAAACGATTT 2060326 >seq2315 Length=138946 Score = 131 bits (144), Expect = 3e-25 Identities = 146/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 193167 GCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCA 193226 |||| ||| || |||| ||||| || | || | | ||| || || ||||| || ||| Sbjct 28213 GCCTTTTTGGA--TATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCA 28156 Query 193227 AAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATA 193286 |||||||||| ||| ||||| || || ||||||||||| ||||| ||||| | |||| | Sbjct 28155 AAAATTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACA 28096 Query 193287 TTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGttttt 193346 ||| ||| ||||| || | || || || || || || ||||| ||||| || || || Sbjct 28095 TTTTCAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTC 28036 Query 193347 acaaatatttgcat 193360 |||||||| ||||| Sbjct 28035 ACAAATATCTGCAT 28022 Score = 127 bits (140), Expect = 4e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| ||||| || | || | | ||| || || ||||| || ||||||||||||| Sbjct 27702 AATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATTAATCG 27643 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| ||||| || || ||||||||||| ||||| || || | |||| |||| ||| || Sbjct 27642 CTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 27583 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357 ||| || | || || || || || || ||||| ||||| || || || |||||||| || Sbjct 27582 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 27523 Query 193358 cat 193360 ||| Sbjct 27522 CAT 27520 Score = 123 bits (136), Expect = 4e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| |||||||| || | || | ||| || | ||||| || || ||||| ||||| Sbjct 26960 AATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAATCAATCT 26901 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| ||||||||||| || || ||||| ||||| ||||| | ||||| ||| ||| || Sbjct 26900 CTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCTCAATGGT 26841 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357 ||| || | || || || || ||||| |||||||| || || ||||| ||||| || || Sbjct 26840 ATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAAAAATCTG 26781 Query 193358 cat 193360 ||| Sbjct 26780 CAT 26778 Score = 123 bits (136), Expect = 4e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| ||||| || | || | ||| || || |||||||| ||||||||||||| Sbjct 29143 AATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATTAATCG 29084 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| || || || || ||||||||||| ||||| || || | |||| |||| ||| || Sbjct 29083 CTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 29024 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357 ||| || | || || || || || || ||||| ||||| || || || |||||||| || Sbjct 29023 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 28964 Query 193358 cat 193360 ||| Sbjct 28963 CAT 28961 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || || ||||| || | ||| || ||||||||||| || ||||| || |||||||| Sbjct 27276 TGCTTACCAGCAAAGATAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATC 27217 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | ||||| |||| ||| ||||| || | || ||||| | || |||||||| || Sbjct 27216 TTTGCTTTTACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCA 27157 Query 193335 GTTAGCGtttttacaaatatttgcatt 193361 || | || || || || ||||||||| Sbjct 27156 GTCAAAGTCTTAACGAAGATTTGCATT 27130 >seq1551 Length=444118 Score = 118 bits (130), Expect = 2e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||| || | |||||||| | ||| | ||||| |||||| ||||| Sbjct 25338 ATACCACCTCTCAACCGGAAAACCAGATGAAGTGTGGATTCTTTCTGAATATTGTAGTCT 25397 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || ||||| ||| || | || || |||||||| || ||||||||||| || ||| Sbjct 25398 GACAATGTTCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGA 25457 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || ||||||| ||| | ||| ||| || || |||| ||| Sbjct 25458 GGAATGCCTTCCTTGCTCTGAATTTTGGATTTAACGTTTTTAATCGTGTCTGAAGCCTCG 25517 Query 193311 ACTTC 193315 ||||| Sbjct 25518 ACTTC 25522 >seq3439 Length=31086 Score = 105 bits (116), Expect = 1e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 2354 TCTAATCTAATCCAGTTATCAAATCGTTTACCACCGTCTTTGCATAACTTAGTAGCATTA 2413 || ||||| | ||| |||||||| ||||| ||| | | |||| ||| |||||||| Sbjct 10451 TCCAATCTTAGCCAATTATCAAAACGTTTTTTACCAGCCTGACATAGCTTCGTAGCATTG 10510 Query 2414 AAATATCCAGTGTTTTTATCTATTATAAGTTTAAAATCACCGAATAATCCATAATAAAAT 2473 || |||||||| ||||||||| | ||||||||||| || || | ||||| | || Sbjct 10511 AAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCATACCAGTAT 10570 Query 2474 GAGTCTTTAATCTGTTCGTAACATATATCGTTTAGAGACAT 2514 ||||| || ||||| ||||||| |||||| ||||| || Sbjct 10571 TGATCTTTGATTTGTTCATAACATACATCGTTAAGAGATAT 10611 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 278678 AACGATATATGTTACGAACAGATTAAAGACTCATTTTATTATGGATTATTCGGTGATTTT 278737 |||||| ||||||| ||||| || ||||| || | ||||| | || || |||||| Sbjct 10602 AACGATGTATGTTATGAACAAATCAAAGATCAATACTGGTATGGTCTCTTTGGAGATTTT 10543 Query 278738 AAACTTATAATAGATAAAAACACTGGATATTTTAATGCTACTAAGTTATGCAAAGACGGT 278797 ||||| | ||||||||| |||||||| || |||||||| ||| |||| | | ||| Sbjct 10542 AAACTGGTCATAGATAAATCTACTGGATACTTCAATGCTACGAAGCTATGTCAGGCTGGT 10483 Query 278798 GGTAAACGATTTGATAACTGGATTAGATTAGA 278829 ||||| |||||||| ||| | ||||| || Sbjct 10482 AAAAAACGTTTTGATAATTGGCTAAGATTGGA 10451 Score = 89.7 bits (98), Expect = 9e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 192579 ACATAATTTAGTAGCATTAAAATAACCAGTATTTTTATCTATTACGAGTTTAAAATCACC 192638 ||||| || |||||||| || || |||||| ||||||||| || ||||||||||| || Sbjct 10492 ACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCC 10551 Query 192639 GAATAATCCATAATAAAAAGAGTCTTTGATGTGTTCGTAACAAATATCGTTAAGAGA 192695 || | ||||| | | |||||||| ||||| ||||| | |||||||||||| Sbjct 10552 AAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACATACATCGTTAAGAGA 10608 Score = 87.8 bits (96), Expect = 3e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 150072 TTCCAATCGCTTCCAATTAAAATAATCTTTATTTCCTAATTTACATAATTTTGTAGCGTT 150131 |||||||| ||||||| | || ||| || || | ||||| || ||||| || Sbjct 10450 TTCCAATCTTAGCCAATTATCAAAACGTTTTTTACCAGCCTGACATAGCTTCGTAGCATT 10509 Query 150132 AAAGCATCCGGTATTTTTATCTATTACTAGTTTAAAATCACCGAATAATCCGTAATAAAA 150191 ||| |||| ||| ||||||||| || ||||||||||| || || | || || | | Sbjct 10510 GAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCATACCAGTA 10569 Query 150192 TGTATCTTTGATATGTTCGTAACATATATCGTT 150224 | ||||||||| ||||| ||||||| |||||| Sbjct 10570 TTGATCTTTGATTTGTTCATAACATACATCGTT 10602 >seq123 Length=2135277 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 2318 TTATCGTTATAATATTTTATTAATTCTTTGGATT-TATCTAATCTAATCCAGTTATCAAA 2376 || || |||||||| || ||||||| ||| |||| | | | || || | | | ||| Sbjct 576775 TTTTCTTTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCAACCAATGAAAGAAA 576834 Query 2377 TCGTTTACCACCGTCTTTGCATAACTTAGTAGCATTAAAATATCCAGTGTTTTTATCTAT 2436 | ||| ||||| ||||| ||||||||||| || || ||||||||||| ||||||||| Sbjct 576835 TTCTTT-CCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTAT 576893 Query 2437 TATAAGTTTAAAATCACCGAATAATCCATAATAAAATGAGTCTTTA---ATCTGTTCGTA 2493 | || || ||||| || || | ||||| | || | |||| || ||||| || Sbjct 576894 AACCAGCTTGAAATCTCCAAAGAGACCATACCAGTAT---TGTTTAACGATTTGTTCATA 576950 Query 2494 ACATATATCGTTTAGAGACAT 2514 ||||| || || |||||||| Sbjct 576951 ACATACATTATTCAGAGACAT 576971 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 147851 TTAAAATAATTTATTAAATCTTTAGATT-TATCTAATCTAGACCAATTATAAAATTTCTT 147909 ||| ||||||| ||||| | ||| |||| | | | || | |||||| | | || ||||| Sbjct 576781 TTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCA-ACCAATGAAAGAAATTCTT 576839 Query 147910 ACCACCATCTTTACATAGCTTGGTAGCGTTAAAATAACCGGTGTTTTTATCTATAATTAA 147969 |||||||||||||||| ||| || ||||| ||||| || || ||||||||||| | Sbjct 576840 TCCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTATAACCAG 576899 Query 147970 TTTAAAATCACCAAATACACTATA 147993 || ||||| ||||| | || ||| Sbjct 576900 CTTGAAATCTCCAAAGAGACCATA 576923 Score = 93.3 bits (102), Expect = 8e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3444 TTTTCATTGTAAAATTCTATTAATTCCTTAGATTTAGAGTTTTCGTACCAATGTTTAAAT 3503 ||||| || ||| | | ||||||| || |||| ||| || ||||||| || Sbjct 576775 TTTTCTTTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCAACCAATGAAAGAAA 576834 Query 3504 TTCTTTCCTCCGTCTTTACATAACTTAGTAGCATTAAAATATCCAGTGTTTTTATCTATT 3563 |||||||| || ||||||||||||||||| || || ||||||||||| ||||||||| Sbjct 576835 TTCTTTCCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTATA 576894 Query 3564 ATAAGTTTAAAATCACCGAATAATCCATA 3592 | || || ||||| || || | ||||| Sbjct 576895 ACCAGCTTGAAATCTCCAAAGAGACCATA 576923 Score = 93.3 bits (102), Expect = 8e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 277591 TATGGATTATTCGGTGATTTTAAACTTATAATAGATAAAAACACTGGATATTTTAATGCT 277650 ||||| | || || ||||| || || | ||||||||| ||||||||||| || || Sbjct 576923 TATGGTCTCTTTGGAGATTTCAAGCTGGTTATAGATAAATCTACTGGATATTTCAACGCC 576864 Query 277651 ACTAAGTTATGTAAAGACGGAGGAAAGAAATTTAAACATTGGTACGAAAACTCTAAATCT 277710 ||||||||||||||||| || |||||||| || ||||||| || ||| |||| Sbjct 576863 ACTAAGTTATGTAAAGATGGTGGAAAGAATTTCTTTCATTGGTTGGAGAACAAACAATCA 576804 Query 277711 AAGGAATTAATAGAATTTTACAATGAAAA 277739 || ||||||| | | ||| || ||||| Sbjct 576803 AAAAAATTAATTAATTATTATAAAGAAAA 576775 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/188 (71%), Gaps = 8/188 (4%) Strand=Plus/Minus Query 278682 ATATATGTTACGAACAGAT---TAAAGACTCATTTTATTATGGATTATTCGGTGATTTTA 278738 || ||||||| ||||| || |||| | || | ||||| | || || ||||| | Sbjct 576958 ATGTATGTTATGAACAAATCGTTAAACA---ATACTGGTATGGTCTCTTTGGAGATTTCA 576902 Query 278739 AACTTATAATAGATAAAAACACTGGATATTTTAATGCTACTAAGTTATGCAAAGACGGTG 278798 | || | ||||||||| ||||||||||| || || ||||||||||| ||||| |||| Sbjct 576901 AGCTGGTTATAGATAAATCTACTGGATATTTCAACGCCACTAAGTTATGTAAAGATGGTG 576842 Query 278799 GTAAACGATTTGATAACTGGATTAGATTAGATA-AATCCAAAGAATTAATAAAATATTAT 278857 | ||| |||| | | | || || | | | |||| ||| ||||||| || |||||| Sbjct 576841 G-AAAGAATTTCTTTCATTGGTTGGAGAACAAACAATCAAAAAAATTAATTAATTATTAT 576783 Query 278858 AACGATAA 278865 || || || Sbjct 576782 AAAGAAAA 576775 >seq1206 Length=549353 Score = 93.3 bits (102), Expect = 8e-14 Identities = 119/161 (74%), Gaps = 5/161 (3%) Strand=Plus/Minus Query 192568 CCTCCTAAATTACATAATTTAGTAGCATTAAAATAACCAGTATTTTTATCTATTACGAGT 192627 ||||| |||||||||||| |||||||||||| |||||||| |||||||| || || Sbjct 366503 CCTCCACTATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGA 366444 Query 192628 TTAAAATCACCGAATAATCCATAATAAAAAGAGTCTTTGATGTGTTCGTAACAAATATCG 192687 ||||| | || || | ||||| || | |||||||| |||| ||||| | || Sbjct 366443 TTAAATTTTCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAATTA 366384 Query 192688 TTAAGAGAATTCATT--TTA--TTTTTGATTT-TAAATATA 192723 |||||||| | ||| ||| | |||||||| | |||||| Sbjct 366383 TTAAGAGACATGATTTGTTAAGTGTTTGATTTATTAATATA 366343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899375597101440