Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq714 147 4e-30 seq242 147 4e-30 seq783 134 2e-26 seq2315 132 9e-26 seq39 127 4e-24 seq1206 100 5e-16 seq123 98.7 2e-15 seq1551 95.1 2e-14 seq3439 91.5 3e-13 >seq714 Length=734366 Score = 147 bits (162), Expect = 4e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209 || ||||| || || ||||| || || ||||| ||||||||||| | |||||| || || Sbjct 43904 TCATCCCTTGAAATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTC 43963 Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269 ||||| || ||||| ||||| || | || ||||| ||||||||||| ||||||||| Sbjct 43964 AGCCAGAAAATTGAAGCAAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGCT 44023 Query 39270 ATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCAATTTATGGCCCAATCTGCt 39329 | | ||| | ||| | || |||||| | |||||| | | ||||||||||||| Sbjct 44024 ACCACTCTCTCGCCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATCTGCT 44083 Query 39330 ttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370 || ||||| | | | || || |||| ||||| |||||||| Sbjct 44084 TTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAATAA 44124 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 39615 TTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTTTATACATTTGA 39674 ||||||||||||||||||||| |||||| || || ||| | | |||||| |||||||| Sbjct 55186 TTTGATAAATCTACTTCTTCTGCTGTCCAGAATGAGGCTTCAGCTTTTTTGTACATTTGC 55245 Query 39675 TATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAtttttttCTAATATC 39734 | ||||| || | ||| ||||| | |||| ||| | | | ||| | | ||||| Sbjct 55246 CAAATATCTTGATACTGAATAGGAAAAATCACAAATCTTCTTGGATTCTCTCTTAATAAA 55305 Query 39735 GGTTCT 39740 |||||| Sbjct 55306 GGTTCT 55311 >seq242 Length=1788442 Score = 147 bits (162), Expect = 4e-30 Identities = 143/184 (78%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||| || | | |||| | || || | || || ||||||||||| ||||| Sbjct 1569959 AATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAATCAATCT 1569900 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 |||||| ||||| || || ||||| || ||||| ||||| ||| ||||| ||||| Sbjct 1569899 CTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGT 1569840 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || | ||| || || || ||||| |||||||| ||||| ||||| | ||||||||| Sbjct 1569839 ATCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGAATATCTG 1569780 Query 172067 CATT 172070 |||| Sbjct 1569779 CATT 1569776 >seq783 Length=580412 Score = 134 bits (148), Expect = 2e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| || ||||| | | || | |||| ||||||||||| |||||||| ||||||||| Sbjct 387239 ATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGATTAATCTC 387180 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| || || ||||| ||||| ||||| || ||| || || || || ||| Sbjct 387179 TGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCTCAATGGTA 387120 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| | ||| |||||||| || || ||||| || || | || || | ||| |||||| Sbjct 387119 TCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGAAAATCTGC 387060 Query 172068 AT 172069 || Sbjct 387059 AT 387058 Score = 123 bits (136), Expect = 5e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||||| | || | ||| | |||| ||||| ||| || |||||| Sbjct 390358 ATACCACCACGAAGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCT 390299 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| |||| || | || || |||||||| || |||||||||||||| || Sbjct 390298 GAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGG 390239 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || ||||| ||| ||||| || ||||| || | || Sbjct 390238 GGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCG 390179 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | |||||| ||||| || || | ||||| | || ||||||||| Sbjct 390178 ACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCATT 390128 Score = 120 bits (132), Expect = 5e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||||| || || | ||| | |||| ||||| ||| || || || Sbjct 390130 ATTCCACCACGAAGTCGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCG 390071 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | || || || ||||| || |||||||||||||| || Sbjct 390070 GACAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGG 390011 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| ||||| || || || ||| ||||| || || ||||| | || Sbjct 390010 GGAATGCCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCA 389951 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||||||||| |||||||| ||||| | || || | || ||||||||| Sbjct 389950 ACTTCTAGAGTGATGGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 389900 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| || ||||| | || | | | || || | || || |||||||| || ||||| Sbjct 390539 AATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGATCAATCT 390480 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || || ||||| || || || || || ||| || || || || Sbjct 390479 CTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTTCGATCGT 390420 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| | || ||||| | ||| |||||||||||||| | ||||| | ||| ||||| Sbjct 390419 GTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGAAAATCTG 390360 Query 172067 CAT 172069 ||| Sbjct 390359 CAT 390357 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| || |||| | || || || | ||| | || || ||| || || || || Sbjct 391351 CCACCCCTGAGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGAC 391292 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | |||| | || || | ||||||||||||||| || | | ||| || || || || Sbjct 391291 AGGGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 391232 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || || || ||||| || ||||| ||| ||||| || || ||||| | || ||| Sbjct 391231 ATGCCCTCCTTATCCTGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACT 391172 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| |||||||| ||||| || || || | ||| |||||||| Sbjct 391171 TCCAAAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125 >seq2315 Length=138946 Score = 132 bits (146), Expect = 9e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||||| || || | || ||||| | ||||| |||||| |||||| |||||||| Sbjct 33220 ACCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGA 33161 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | || | || || | ||||| ||||||||||| | |||||| ||||| || || Sbjct 33160 AAGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGG 33101 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||||| || |||||||| || || ||||||||| || |||||||| | ||| || Sbjct 33100 GATTCCCTCCTTATCTTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCAC 33041 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| | ||||| || || || || || || || | || |||||||| Sbjct 33040 TTCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| ||||| ||||| | | ||| | || |||| ||||| || || ||||| ||||| Sbjct 26960 AATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAATCAATCT 26901 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || ||||| || || || ||||| ||||| ||||| ||||||||| || || Sbjct 26900 CTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCTCAATGGT 26841 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || | ||| || || || || |||||||||||||| | ||||| | || ||||| Sbjct 26840 ATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAAAAATCTG 26781 Query 172067 CAT 172069 ||| Sbjct 26780 CAT 26778 Score = 118 bits (130), Expect = 2e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| || ||||||||||||| ||| || || ||||| ||||||||||| Sbjct 28176 TCTTCCAACTGTTTGCCTGCAAAAATTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTG 28117 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| ||||| |||||||| || ||||| || | |||||| || || || ||| Sbjct 28116 TCTTGAATTTTTGCCTTTACATTTTCAATGGTATCAGATGGTTCTACCTCCAGTGTGATG 28057 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | || || | ||||||||||| Sbjct 28056 GTTTTGCCTGTGAGGGTCTTCACAAATATCTGCAT 28022 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| || || || | | || | || ||||| ||||| || ||||||||||||| Sbjct 29143 AATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATTAATCG 29084 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| ||||| ||||||||||| ||||| || || |||||||| || || Sbjct 29083 CTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 29024 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || | |||||| || || || |||||||| || || | || || | |||||||| Sbjct 29023 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 28964 Query 172067 CAT 172069 ||| Sbjct 28963 CAT 28961 Score = 114 bits (126), Expect = 2e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| || || || | | || | || ||||| ||||| || ||||||||||||| Sbjct 27702 AATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATTAATCG 27643 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || ||||| ||||||||||| ||||| || || |||||||| || || Sbjct 27642 CTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 27583 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || | |||||| || || || |||||||| || || | || || | |||||||| Sbjct 27582 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 27523 Query 172067 CAT 172069 ||| Sbjct 27522 CAT 27520 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| || ||||||||||| || | ||| || || ||||| || || ||||| || Sbjct 27285 TCCTCCAGCTGCTTACCAGCAAAGATAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTG 27226 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 |||||||| || ||||||||| || ||||| || | ||| ||||| | || || Sbjct 27225 TCTTGTATCTTTGCTTTTACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATA 27166 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| ||||| || || |||| ||| || |||||| Sbjct 27165 GTTTTTCCAGTCAAAGTCTTAACGAAGATTTGCATT 27130 >seq39 Length=3240425 Score = 127 bits (140), Expect = 4e-24 Identities = 147/192 (77%), Gaps = 7/192 (4%) Strand=Plus/Plus Query 265919 ATAAATTTTTTGATCTTT-CTAATCTTTTCCATTTAAAATAATCCTTTGCCCCCAATTT- 265976 |||| || |||| | ||| |||||| |||| || | |||| ||| || ||| | | Sbjct 2060288 ATAAGTTGTTTGCTGTTTTCTAATCGCATCCAGTTTCTA-AATCGTTTACCGCCACTATG 2060346 Query 265977 ACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACC 266036 |||||||||||||||||||||| ||||||| || ||||| ||||| || |||||||| || Sbjct 2060347 ACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCC 2060406 Query 266037 AAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAAC--AGATTGAATTTAATGAC 266094 ||| | |||||| |||| | ||||| || |||||||||| | |||| || | ||| Sbjct 2060407 AAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATACATTG--TTGAGAGAC 2060464 Query 266095 ATTTTTTATTAA 266106 || |||| |||| Sbjct 2060465 ATGTTTTGTTAA 2060476 Score = 127 bits (140), Expect = 4e-24 Identities = 127/163 (78%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 263814 TCCAATGTTTAAATTGCTTACCACCCAAATTACATAATTTAGTAGCATTAAAAAATCCAG 263873 |||| | | ||||| | ||||| || || |||||||||||||||||||||| |||||| Sbjct 2060316 TCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCATTAAAACATCCAG 2060375 Query 263874 TTGATTTATCAATAACTAATTTAAAATCACCAAATAAACCATAGTAATAATTATCTTTAA 263933 | || ||||| ||||| || |||||||| ||||| | |||||| |||| | ||||| | Sbjct 2060376 TCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGA 2060435 Query 263934 TGTGTTCATAAC--AGATTGAATTTAATGACATTTTTTATTAA 263974 | |||||||||| | |||| || | ||||| |||| |||| Sbjct 2060436 TTTGTTCATAACATACATTG--TTGAGAGACATGTTTTGTTAA 2060476 Score = 123 bits (136), Expect = 5e-23 Identities = 160/213 (75%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 267045 ATTTTGGTGGTCGACATCGCGACTACCAAAATTTTTAATTA-AATAATTAATATATGATT 267103 ||||||| || ||||| ||||| || ||||| ||| |||| || ||| | || Sbjct 2060239 ATTTTGGGGGCTCACATCTGAGCTACCTAA-TTTTTCTTTATAATACTTGATAAGTTGTT 2060297 Query 267104 TTGATGTTTT-TAATT-CATACCAATGTTTATATTGCTTACCACCTAAATTACATAATTT 267161 | | |||||| |||| ||| ||| | | || || | ||||| || || ||||||||| Sbjct 2060298 T-GCTGTTTTCTAATCGCAT-CCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTT 2060355 Query 267162 AGTAGCATTAAAAAATCCAGTCGATTTATCAATAACTAATTTAAAATCACCAAATAAACC 267221 ||||||||||||| |||||||||| ||||| ||||| || |||||||| ||||| | ||| Sbjct 2060356 AGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACC 2060415 Query 267222 ATAATAATAATTATCTTTAATGTTCTCATAACA 267254 ||| |||| | ||||| || | |||||||| Sbjct 2060416 ATACCAATACTGGTCTTTGATTTGTTCATAACA 2060448 Score = 118 bits (130), Expect = 2e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 87291 CCAATTACTAAATCTTTTGCCACCCAAATTACATAATTTAGTTGCGTTAAAACAACCTGT 87350 ||| || ||||||| ||| || || || |||||||||||| || |||||||| || || Sbjct 2060317 CCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCATTAAAACATCCAGT 2060376 Query 87351 ATTTTTATCTATAACTAGTTTAAAATCACCAAATAAACCATAGTAATAATGGTCTTTAAT 87410 ||||||||||| | |||||||| ||||| | |||||| |||| |||||||| || Sbjct 2060377 CGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGAT 2060436 Query 87411 TTTCTCATAACATATATCTATTAGAGACATTTT 87443 || |||||||||| || | |||||||| || Sbjct 2060437 TTGTTCATAACATACATTGTTGAGAGACATGTT 2060469 Score = 105 bits (116), Expect = 1e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 86205 ATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATC 86264 || |||||||||||| || |||||||| || || ||||||||||| | |||||||| Sbjct 2060344 ATGACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATC 2060403 Query 86265 ACCAAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATTAGAGA 86324 ||||| | |||||| |||| |||||||| |||| |||||||||| || | ||||| Sbjct 2060404 TCCAAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATACATTGTTGAGAGA 2060463 Query 86325 CATTTT 86330 ||| || Sbjct 2060464 CATGTT 2060469 Score = 100 bits (110), Expect = 5e-16 Identities = 97/123 (79%), Gaps = 4/123 (3%) Strand=Plus/Plus Query 264941 AGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACCAAATAAACC 265000 ||||||||||||| ||||||| || ||||| ||||| || |||||||| ||||| | ||| Sbjct 2060356 AGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACC 2060415 Query 265001 ATAGTAATAATTATCTTTAATGTGTTCATAAC--AGATTGAATTTAATGACATTTTTTAT 265058 ||| |||| | ||||| || |||||||||| | |||| || | ||||| |||| | Sbjct 2060416 ATACCAATACTGGTCTTTGATTTGTTCATAACATACATTG--TTGAGAGACATGTTTTGT 2060473 Query 265059 TAA 265061 ||| Sbjct 2060474 TAA 2060476 Score = 96.9 bits (106), Expect = 6e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 85095 ACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATGACTAATTTAAAATCACC 85154 |||||||||||| || |||||||| || || |||||||| || || |||||||| || Sbjct 2060347 ACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCC 2060406 Query 85155 AAATAAACCATAGTAATATTGGTCTTTTATTTTCTCATAGCACACATCTACTAGAGACAT 85214 ||| | |||||| |||| |||||||| |||| ||||| || |||| |||||||| Sbjct 2060407 AAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATACATTGTTGAGAGACAT 2060466 Query 85215 TTT 85217 || Sbjct 2060467 GTT 2060469 >seq1206 Length=549353 Score = 100 bits (110), Expect = 5e-16 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 87318 ATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATC 87377 |||||||||||| || || ||||||||||| ||| |||||||| || || ||||| | Sbjct 366495 ATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTT 366436 Query 87378 ACCAAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATT-AGAG 87436 ||||| | |||||| |||| || ||||| |||| | |||||||| || |||| |||| Sbjct 366435 TCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAAT-TATTAAGAG 366377 Query 87437 ACAT 87440 |||| Sbjct 366376 ACAT 366373 Score = 100 bits (110), Expect = 5e-16 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 86205 ATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATC 86264 |||||||||||| || || ||||||||||| ||| |||||||| || || ||||| | Sbjct 366495 ATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTT 366436 Query 86265 ACCAAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATT-AGAG 86323 ||||| | |||||| |||| || ||||| |||| | |||||||| || |||| |||| Sbjct 366435 TCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAAT-TATTAAGAG 366377 Query 86324 ACAT 86327 |||| Sbjct 366376 ACAT 366373 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 263842 ATTACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATC 263901 |||||||||||| |||||||||||| | ||||| || ||||| || || | ||||| | Sbjct 366495 ATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTT 366436 Query 263902 ACCAAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACAGATTGAATTTAATGA 263961 ||||| | |||||| |||| | |||||| || |||| |||||| | ||| | || Sbjct 366435 TCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAATTATTAAGAGA 366376 Query 263962 CATTTTTTATTAA 263974 ||| ||| |||| Sbjct 366375 CATGATTTGTTAA 366363 Score = 89.7 bits (98), Expect = 9e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 265975 TTACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCA 266034 ||||||||||| |||||||||||| | ||||| || ||||| || || | ||||| | Sbjct 366494 TTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTTT 366435 Query 266035 CCAAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACAGATTGAATTTAATGAC 266094 ||||| | |||||| |||| | |||||| || |||| |||||| | ||| | ||| Sbjct 366434 CCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAATTATTAAGAGAC 366375 Query 266095 ATTTTTTATTAA 266106 || ||| |||| Sbjct 366374 ATGATTTGTTAA 366363 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 85093 TTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATGACTAATTTAAAATCA 85152 ||||||||||| || || ||||||||||| ||| ||||||||||| | ||||| | Sbjct 366494 TTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTTT 366435 Query 85153 CCAAATAAACCATAGTAATATTGGTCTTTTATTTTCTCATAGCACACATCTACT-AGAGA 85211 ||||| | |||||| |||| || ||||| |||| | ||| || | || || | ||||| Sbjct 366434 CCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAAT-TATTAAGAGA 366376 Query 85212 CAT 85214 ||| Sbjct 366375 CAT 366373 >seq123 Length=2135277 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/207 (72%), Gaps = 9/207 (4%) Strand=Plus/Plus Query 87242 AATTTTTATTCAAAA-AATTAATTAATTCCATAGATTTGGTATTTTGTGACCAATTACTA 87300 ||||||| || | || |||||||||||| | |||| | || | |||||| | Sbjct 576772 AATTTTTCTTTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCAACCAATGAAAG 576831 Query 87301 AATCTTTTGCCACCCAAATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCT 87360 || | || ||||| |||||||| ||||| ||||| ||| | || ||| ||||||| Sbjct 576832 AAATTCTTTCCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCT 576891 Query 87361 ATAACTAGTTTAAAATCACCAAATAAACCATAGTAATAATGGTCTTTA---ATTTTCTCA 87417 ||||| || || ||||| ||||| | |||||| | || || |||| |||| ||| Sbjct 576892 ATAACCAGCTTGAAATCTCCAAAGAGACCATACCAGTATTG---TTTAACGATTTGTTCA 576948 Query 87418 TAACATATATCTATT-AGAGACATTTT 87443 ||||||| || |||| |||||||| || Sbjct 576949 TAACATACAT-TATTCAGAGACATGTT 576974 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/129 (77%), Gaps = 8/129 (6%) Strand=Plus/Plus Query 86206 TTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATCA 86265 |||||||| ||||| ||||| ||| | || ||| |||||||||||| || || ||||| Sbjct 576850 TTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTATAACCAGCTTGAAATCT 576909 Query 86266 CCAAATAAACCATAGTAATAATGGTCTTTA---ATTTTCTCATAACATATATCTATT-AG 86321 ||||| | |||||| | || || |||| |||| |||||||||| || |||| || Sbjct 576910 CCAAAGAGACCATACCAGTATTG---TTTAACGATTTGTTCATAACATACAT-TATTCAG 576965 Query 86322 AGACATTTT 86330 |||||| || Sbjct 576966 AGACATGTT 576974 >seq1551 Length=444118 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 ||||||||||||||| || | | ||| || || || ||||| || | ||||| || || Sbjct 25193 TTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCCTTATCCTGGAT 25252 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 ||| ||||||||| || || ||||| | || ||||| | ||| |||||||| || Sbjct 25253 TTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTGCC 25312 Query 172043 AGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || || || | ||| |||||||| Sbjct 25313 AGTCAAAGTCTTGACGAAAATCTGCAT 25339 >seq3439 Length=31086 Score = 91.5 bits (100), Expect = 3e-13 Identities = 90/116 (78%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 263831 TTACCACCCAAATTACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACT 263890 |||||| || | ||||| || |||||||| || ||||||| |||||||| || || Sbjct 10481 TTACCAGCC---TGACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACC 10537 Query 263891 AATTTAAAATCACCAAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACA 263946 | ||||||||| ||||| | |||||| | || | |||||| || ||||||||||| Sbjct 10538 AGTTTAAAATCTCCAAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACA 10593 Score = 89.7 bits (98), Expect = 9e-13 Identities = 131/182 (72%), Gaps = 10/182 (5%) Strand=Plus/Plus Query 87291 CCAATTACTAAATC---TTTTGCCACCCAAATTACATAATTTAGTTGCGTTAAAACAACC 87347 ||||||| ||| | |||| ||| || | ||||| || || || || || | || Sbjct 10462 CCAATTATCAAAACGTTTTTTACCAGCC---TGACATAGCTTCGTAGCATTGAAGTATCC 10518 Query 87348 TGTATTTTTATCTATAACTAGTTTAAAATCACCAAATAAACCATAGTAATAATGGTCTTT 87407 ||| ||||||||| || ||||||||||| ||||| | |||||| | || || ||||| Sbjct 10519 AGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCATACCAGTATTGATCTTT 10578 Query 87408 AATTTTCTCATAACATATATCTATTAGAGACAT--TTTCAAAGTT--TTATTTTTAATTA 87463 |||| |||||||||| ||| | ||||| || || |||| |||||| |||||| Sbjct 10579 GATTTGTTCATAACATACATCGTTAAGAGATATGATTGTTGAGTTCATTATTTATAATTA 10638 Query 87464 TA 87465 || Sbjct 10639 TA 10640 Score = 89.7 bits (98), Expect = 9e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 265977 ACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACC 266036 ||||| || |||||||| || ||||||| |||||||| || || | ||||||||| || Sbjct 10492 ACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCC 10551 Query 266037 AAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACA 266078 ||| | |||||| | || | |||||| || ||||||||||| Sbjct 10552 AAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACA 10593 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/149 (74%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 86208 ACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATCACC 86267 ||||| || || || || || | || ||| ||||||||| || ||||||||||| || Sbjct 10492 ACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCC 10551 Query 86268 AAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATTAGAGACAT 86327 ||| | |||||| | || || ||||| |||| |||||||||| ||| | ||||| || Sbjct 10552 AAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACATACATCGTTAAGAGATAT 10611 Query 86328 --TTTCAAAGTT--TTATTTTTAATTATA 86352 || |||| |||||| |||||||| Sbjct 10612 GATTGTTGAGTTCATTATTTATAATTATA 10640 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 264942 GTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACCAAATAAACCA 265001 |||||||| || ||||||| |||||||| || || | ||||||||| ||||| | |||| Sbjct 10502 GTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCA 10561 Query 265002 TAGTAATAATTATCTTTAATGTGTTCATAACA 265033 || | || | |||||| || ||||||||||| Sbjct 10562 TACCAGTATTGATCTTTGATTTGTTCATAACA 10593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904855498353600