Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq714 147 4e-30
seq242 147 4e-30
seq783 134 2e-26
seq2315 132 9e-26
seq39 127 4e-24
seq1206 100 5e-16
seq123 98.7 2e-15
seq1551 95.1 2e-14
seq3439 91.5 3e-13
>seq714
Length=734366
Score = 147 bits (162), Expect = 4e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209
|| ||||| || || ||||| || || ||||| ||||||||||| | |||||| || ||
Sbjct 43904 TCATCCCTTGAAATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTC 43963
Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269
||||| || ||||| ||||| || | || ||||| ||||||||||| |||||||||
Sbjct 43964 AGCCAGAAAATTGAAGCAAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGCT 44023
Query 39270 ATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCAATTTATGGCCCAATCTGCt 39329
| | ||| | ||| | || |||||| | |||||| | | |||||||||||||
Sbjct 44024 ACCACTCTCTCGCCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATCTGCT 44083
Query 39330 ttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370
|| ||||| | | | || || |||| ||||| ||||||||
Sbjct 44084 TTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAATAA 44124
Score = 84.2 bits (92), Expect = 4e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 39615 TTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTTTATACATTTGA 39674
||||||||||||||||||||| |||||| || || ||| | | |||||| ||||||||
Sbjct 55186 TTTGATAAATCTACTTCTTCTGCTGTCCAGAATGAGGCTTCAGCTTTTTTGTACATTTGC 55245
Query 39675 TATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAtttttttCTAATATC 39734
| ||||| || | ||| ||||| | |||| ||| | | | ||| | | |||||
Sbjct 55246 CAAATATCTTGATACTGAATAGGAAAAATCACAAATCTTCTTGGATTCTCTCTTAATAAA 55305
Query 39735 GGTTCT 39740
||||||
Sbjct 55306 GGTTCT 55311
>seq242
Length=1788442
Score = 147 bits (162), Expect = 4e-30
Identities = 143/184 (78%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||| || | | |||| | || || | || || ||||||||||| |||||
Sbjct 1569959 AATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAATCAATCT 1569900
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
|||||| ||||| || || ||||| || ||||| ||||| ||| ||||| |||||
Sbjct 1569899 CTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGT 1569840
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || | ||| || || || ||||| |||||||| ||||| ||||| | |||||||||
Sbjct 1569839 ATCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGAATATCTG 1569780
Query 172067 CATT 172070
||||
Sbjct 1569779 CATT 1569776
>seq783
Length=580412
Score = 134 bits (148), Expect = 2e-26
Identities = 139/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| || ||||| | | || | |||| ||||||||||| |||||||| |||||||||
Sbjct 387239 ATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGATTAATCTC 387180
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|||||||| || || ||||| ||||| ||||| || ||| || || || || |||
Sbjct 387179 TGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCTCAATGGTA 387120
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
||||| | ||| |||||||| || || ||||| || || | || || | ||| ||||||
Sbjct 387119 TCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGAAAATCTGC 387060
Query 172068 AT 172069
||
Sbjct 387059 AT 387058
Score = 123 bits (136), Expect = 5e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||||| | || | ||| | |||| ||||| ||| || ||||||
Sbjct 390358 ATACCACCACGAAGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCT 390299
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || ||| |||| || | || || |||||||| || |||||||||||||| ||
Sbjct 390298 GAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGG 390239
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || ||||| ||| ||||| || ||||| || | ||
Sbjct 390238 GGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCG 390179
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | |||||| ||||| || || | ||||| | || |||||||||
Sbjct 390178 ACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCATT 390128
Score = 120 bits (132), Expect = 5e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | |||||| || || | ||| | |||| ||||| ||| || || ||
Sbjct 390130 ATTCCACCACGAAGTCGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCG 390071
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | |||| | || || | || || || ||||| || |||||||||||||| ||
Sbjct 390070 GACAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGG 390011
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| ||||| || || || ||| ||||| || || ||||| | ||
Sbjct 390010 GGAATGCCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCA 389951
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||||||||| |||||||| ||||| | || || | || |||||||||
Sbjct 389950 ACTTCTAGAGTGATGGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 389900
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||| || ||||| | || | | | || || | || || |||||||| || |||||
Sbjct 390539 AATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGATCAATCT 390480
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||||||||| || || || ||||| || || || || || ||| || || || ||
Sbjct 390479 CTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTTCGATCGT 390420
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||||| | || ||||| | ||| |||||||||||||| | ||||| | ||| |||||
Sbjct 390419 GTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGAAAATCTG 390360
Query 172067 CAT 172069
|||
Sbjct 390359 CAT 390357
Score = 98.7 bits (108), Expect = 2e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| || |||| | || || || | ||| | || || ||| || || || ||
Sbjct 391351 CCACCCCTGAGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGAC 391292
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| | |||| | || || | ||||||||||||||| || | | ||| || || || ||
Sbjct 391291 AGGGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 391232
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|| || || ||||| || ||||| ||| ||||| || || ||||| | || |||
Sbjct 391231 ATGCCCTCCTTATCCTGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACT 391172
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| | ||| |||||||| ||||| || || || | ||| ||||||||
Sbjct 391171 TCCAAAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125
>seq2315
Length=138946
Score = 132 bits (146), Expect = 9e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||||| || || | || ||||| | ||||| |||||| |||||| ||||||||
Sbjct 33220 ACCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGA 33161
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | || | || || | ||||| ||||||||||| | |||||| ||||| || ||
Sbjct 33160 AAGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGG 33101
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
||||| || |||||||| || || ||||||||| || |||||||| | ||| ||
Sbjct 33100 GATTCCCTCCTTATCTTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCAC 33041
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||| | ||||| || || || || || || || | || ||||||||
Sbjct 33040 TTCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993
Score = 118 bits (130), Expect = 2e-21
Identities = 136/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| ||||| ||||| | | ||| | || |||| ||||| || || ||||| |||||
Sbjct 26960 AATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAATCAATCT 26901
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || ||||| || || || ||||| ||||| ||||| ||||||||| || ||
Sbjct 26900 CTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCTCAATGGT 26841
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || | ||| || || || || |||||||||||||| | ||||| | || |||||
Sbjct 26840 ATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAAAAATCTG 26781
Query 172067 CAT 172069
|||
Sbjct 26780 CAT 26778
Score = 118 bits (130), Expect = 2e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||| ||||| || ||||||||||||| ||| || || ||||| |||||||||||
Sbjct 28176 TCTTCCAACTGTTTGCCTGCAAAAATTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTG 28117
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| ||||| |||||||| || ||||| || | |||||| || || || |||
Sbjct 28116 TCTTGAATTTTTGCCTTTACATTTTCAATGGTATCAGATGGTTCTACCTCCAGTGTGATG 28057
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || | || || | |||||||||||
Sbjct 28056 GTTTTGCCTGTGAGGGTCTTCACAAATATCTGCAT 28022
Score = 118 bits (130), Expect = 2e-21
Identities = 136/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||| || || || | | || | || ||||| ||||| || |||||||||||||
Sbjct 29143 AATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATTAATCG 29084
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| ||||| ||||| ||||||||||| ||||| || || |||||||| || ||
Sbjct 29083 CTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 29024
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || | |||||| || || || |||||||| || || | || || | ||||||||
Sbjct 29023 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 28964
Query 172067 CAT 172069
|||
Sbjct 28963 CAT 28961
Score = 114 bits (126), Expect = 2e-20
Identities = 135/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||| || || || | | || | || ||||| ||||| || |||||||||||||
Sbjct 27702 AATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATTAATCG 27643
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || ||||| ||||||||||| ||||| || || |||||||| || ||
Sbjct 27642 CTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATGGT 27583
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || | |||||| || || || |||||||| || || | || || | ||||||||
Sbjct 27582 ATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAATATCTG 27523
Query 172067 CAT 172069
|||
Sbjct 27522 CAT 27520
Score = 102 bits (112), Expect = 1e-16
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| |||| || ||||||||||| || | ||| || || ||||| || || ||||| ||
Sbjct 27285 TCCTCCAGCTGCTTACCAGCAAAGATAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTG 27226
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|||||||| || ||||||||| || ||||| || | ||| ||||| | || ||
Sbjct 27225 TCTTGTATCTTTGCTTTTACATTTTCAATTGTATCAGATGGTTCCACTTCCAAGGTGATA 27166
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| ||||| || || |||| ||| || ||||||
Sbjct 27165 GTTTTTCCAGTCAAAGTCTTAACGAAGATTTGCATT 27130
>seq39
Length=3240425
Score = 127 bits (140), Expect = 4e-24
Identities = 147/192 (77%), Gaps = 7/192 (4%)
Strand=Plus/Plus
Query 265919 ATAAATTTTTTGATCTTT-CTAATCTTTTCCATTTAAAATAATCCTTTGCCCCCAATTT- 265976
|||| || |||| | ||| |||||| |||| || | |||| ||| || ||| | |
Sbjct 2060288 ATAAGTTGTTTGCTGTTTTCTAATCGCATCCAGTTTCTA-AATCGTTTACCGCCACTATG 2060346
Query 265977 ACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACC 266036
|||||||||||||||||||||| ||||||| || ||||| ||||| || |||||||| ||
Sbjct 2060347 ACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCC 2060406
Query 266037 AAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAAC--AGATTGAATTTAATGAC 266094
||| | |||||| |||| | ||||| || |||||||||| | |||| || | |||
Sbjct 2060407 AAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATACATTG--TTGAGAGAC 2060464
Query 266095 ATTTTTTATTAA 266106
|| |||| ||||
Sbjct 2060465 ATGTTTTGTTAA 2060476
Score = 127 bits (140), Expect = 4e-24
Identities = 127/163 (78%), Gaps = 4/163 (2%)
Strand=Plus/Plus
Query 263814 TCCAATGTTTAAATTGCTTACCACCCAAATTACATAATTTAGTAGCATTAAAAAATCCAG 263873
|||| | | ||||| | ||||| || || |||||||||||||||||||||| ||||||
Sbjct 2060316 TCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCATTAAAACATCCAG 2060375
Query 263874 TTGATTTATCAATAACTAATTTAAAATCACCAAATAAACCATAGTAATAATTATCTTTAA 263933
| || ||||| ||||| || |||||||| ||||| | |||||| |||| | ||||| |
Sbjct 2060376 TCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGA 2060435
Query 263934 TGTGTTCATAAC--AGATTGAATTTAATGACATTTTTTATTAA 263974
| |||||||||| | |||| || | ||||| |||| ||||
Sbjct 2060436 TTTGTTCATAACATACATTG--TTGAGAGACATGTTTTGTTAA 2060476
Score = 123 bits (136), Expect = 5e-23
Identities = 160/213 (75%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 267045 ATTTTGGTGGTCGACATCGCGACTACCAAAATTTTTAATTA-AATAATTAATATATGATT 267103
||||||| || ||||| ||||| || ||||| ||| |||| || ||| | ||
Sbjct 2060239 ATTTTGGGGGCTCACATCTGAGCTACCTAA-TTTTTCTTTATAATACTTGATAAGTTGTT 2060297
Query 267104 TTGATGTTTT-TAATT-CATACCAATGTTTATATTGCTTACCACCTAAATTACATAATTT 267161
| | |||||| |||| ||| ||| | | || || | ||||| || || |||||||||
Sbjct 2060298 T-GCTGTTTTCTAATCGCAT-CCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTT 2060355
Query 267162 AGTAGCATTAAAAAATCCAGTCGATTTATCAATAACTAATTTAAAATCACCAAATAAACC 267221
||||||||||||| |||||||||| ||||| ||||| || |||||||| ||||| | |||
Sbjct 2060356 AGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACC 2060415
Query 267222 ATAATAATAATTATCTTTAATGTTCTCATAACA 267254
||| |||| | ||||| || | ||||||||
Sbjct 2060416 ATACCAATACTGGTCTTTGATTTGTTCATAACA 2060448
Score = 118 bits (130), Expect = 2e-21
Identities = 118/153 (77%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 87291 CCAATTACTAAATCTTTTGCCACCCAAATTACATAATTTAGTTGCGTTAAAACAACCTGT 87350
||| || ||||||| ||| || || || |||||||||||| || |||||||| || ||
Sbjct 2060317 CCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCATTAAAACATCCAGT 2060376
Query 87351 ATTTTTATCTATAACTAGTTTAAAATCACCAAATAAACCATAGTAATAATGGTCTTTAAT 87410
||||||||||| | |||||||| ||||| | |||||| |||| |||||||| ||
Sbjct 2060377 CGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGAT 2060436
Query 87411 TTTCTCATAACATATATCTATTAGAGACATTTT 87443
|| |||||||||| || | |||||||| ||
Sbjct 2060437 TTGTTCATAACATACATTGTTGAGAGACATGTT 2060469
Score = 105 bits (116), Expect = 1e-17
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 86205 ATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATC 86264
|| |||||||||||| || |||||||| || || ||||||||||| | ||||||||
Sbjct 2060344 ATGACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATC 2060403
Query 86265 ACCAAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATTAGAGA 86324
||||| | |||||| |||| |||||||| |||| |||||||||| || | |||||
Sbjct 2060404 TCCAAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATACATTGTTGAGAGA 2060463
Query 86325 CATTTT 86330
||| ||
Sbjct 2060464 CATGTT 2060469
Score = 100 bits (110), Expect = 5e-16
Identities = 97/123 (79%), Gaps = 4/123 (3%)
Strand=Plus/Plus
Query 264941 AGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACCAAATAAACC 265000
||||||||||||| ||||||| || ||||| ||||| || |||||||| ||||| | |||
Sbjct 2060356 AGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACC 2060415
Query 265001 ATAGTAATAATTATCTTTAATGTGTTCATAAC--AGATTGAATTTAATGACATTTTTTAT 265058
||| |||| | ||||| || |||||||||| | |||| || | ||||| |||| |
Sbjct 2060416 ATACCAATACTGGTCTTTGATTTGTTCATAACATACATTG--TTGAGAGACATGTTTTGT 2060473
Query 265059 TAA 265061
|||
Sbjct 2060474 TAA 2060476
Score = 96.9 bits (106), Expect = 6e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 85095 ACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATGACTAATTTAAAATCACC 85154
|||||||||||| || |||||||| || || |||||||| || || |||||||| ||
Sbjct 2060347 ACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCC 2060406
Query 85155 AAATAAACCATAGTAATATTGGTCTTTTATTTTCTCATAGCACACATCTACTAGAGACAT 85214
||| | |||||| |||| |||||||| |||| ||||| || |||| ||||||||
Sbjct 2060407 AAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATACATTGTTGAGAGACAT 2060466
Query 85215 TTT 85217
||
Sbjct 2060467 GTT 2060469
>seq1206
Length=549353
Score = 100 bits (110), Expect = 5e-16
Identities = 98/124 (79%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 87318 ATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATC 87377
|||||||||||| || || ||||||||||| ||| |||||||| || || ||||| |
Sbjct 366495 ATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTT 366436
Query 87378 ACCAAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATT-AGAG 87436
||||| | |||||| |||| || ||||| |||| | |||||||| || |||| ||||
Sbjct 366435 TCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAAT-TATTAAGAG 366377
Query 87437 ACAT 87440
||||
Sbjct 366376 ACAT 366373
Score = 100 bits (110), Expect = 5e-16
Identities = 98/124 (79%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 86205 ATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATC 86264
|||||||||||| || || ||||||||||| ||| |||||||| || || ||||| |
Sbjct 366495 ATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTT 366436
Query 86265 ACCAAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATT-AGAG 86323
||||| | |||||| |||| || ||||| |||| | |||||||| || |||| ||||
Sbjct 366435 TCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAAT-TATTAAGAG 366377
Query 86324 ACAT 86327
||||
Sbjct 366376 ACAT 366373
Score = 91.5 bits (100), Expect = 3e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 263842 ATTACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATC 263901
|||||||||||| |||||||||||| | ||||| || ||||| || || | ||||| |
Sbjct 366495 ATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTT 366436
Query 263902 ACCAAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACAGATTGAATTTAATGA 263961
||||| | |||||| |||| | |||||| || |||| |||||| | ||| | ||
Sbjct 366435 TCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAATTATTAAGAGA 366376
Query 263962 CATTTTTTATTAA 263974
||| ||| ||||
Sbjct 366375 CATGATTTGTTAA 366363
Score = 89.7 bits (98), Expect = 9e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 265975 TTACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCA 266034
||||||||||| |||||||||||| | ||||| || ||||| || || | ||||| |
Sbjct 366494 TTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTTT 366435
Query 266035 CCAAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACAGATTGAATTTAATGAC 266094
||||| | |||||| |||| | |||||| || |||| |||||| | ||| | |||
Sbjct 366434 CCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAATTATTAAGAGAC 366375
Query 266095 ATTTTTTATTAA 266106
|| ||| ||||
Sbjct 366374 ATGATTTGTTAA 366363
Score = 84.2 bits (92), Expect = 4e-11
Identities = 94/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 85093 TTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATGACTAATTTAAAATCA 85152
||||||||||| || || ||||||||||| ||| ||||||||||| | ||||| |
Sbjct 366494 TTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGATTAAATTTT 366435
Query 85153 CCAAATAAACCATAGTAATATTGGTCTTTTATTTTCTCATAGCACACATCTACT-AGAGA 85211
||||| | |||||| |||| || ||||| |||| | ||| || | || || | |||||
Sbjct 366434 CCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAAT-TATTAAGAGA 366376
Query 85212 CAT 85214
|||
Sbjct 366375 CAT 366373
>seq123
Length=2135277
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/207 (72%), Gaps = 9/207 (4%)
Strand=Plus/Plus
Query 87242 AATTTTTATTCAAAA-AATTAATTAATTCCATAGATTTGGTATTTTGTGACCAATTACTA 87300
||||||| || | || |||||||||||| | |||| | || | |||||| |
Sbjct 576772 AATTTTTCTTTATAATAATTAATTAATTTTTTTGATTGTTTGTTCTCCAACCAATGAAAG 576831
Query 87301 AATCTTTTGCCACCCAAATTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCT 87360
|| | || ||||| |||||||| ||||| ||||| ||| | || ||| |||||||
Sbjct 576832 AAATTCTTTCCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCT 576891
Query 87361 ATAACTAGTTTAAAATCACCAAATAAACCATAGTAATAATGGTCTTTA---ATTTTCTCA 87417
||||| || || ||||| ||||| | |||||| | || || |||| |||| |||
Sbjct 576892 ATAACCAGCTTGAAATCTCCAAAGAGACCATACCAGTATTG---TTTAACGATTTGTTCA 576948
Query 87418 TAACATATATCTATT-AGAGACATTTT 87443
||||||| || |||| |||||||| ||
Sbjct 576949 TAACATACAT-TATTCAGAGACATGTT 576974
Score = 87.8 bits (96), Expect = 3e-12
Identities = 99/129 (77%), Gaps = 8/129 (6%)
Strand=Plus/Plus
Query 86206 TTACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATCA 86265
|||||||| ||||| ||||| ||| | || ||| |||||||||||| || || |||||
Sbjct 576850 TTACATAACTTAGTGGCGTTGAAATATCCAGTAGATTTATCTATAACCAGCTTGAAATCT 576909
Query 86266 CCAAATAAACCATAGTAATAATGGTCTTTA---ATTTTCTCATAACATATATCTATT-AG 86321
||||| | |||||| | || || |||| |||| |||||||||| || |||| ||
Sbjct 576910 CCAAAGAGACCATACCAGTATTG---TTTAACGATTTGTTCATAACATACAT-TATTCAG 576965
Query 86322 AGACATTTT 86330
|||||| ||
Sbjct 576966 AGACATGTT 576974
>seq1551
Length=444118
Score = 95.1 bits (104), Expect = 2e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982
||||||||||||||| || | | ||| || || || ||||| || | ||||| || ||
Sbjct 25193 TTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCCTTATCCTGGAT 25252
Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042
||| ||||||||| || || ||||| | || ||||| | ||| |||||||| ||
Sbjct 25253 TTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTGCC 25312
Query 172043 AGTTAATGTTTTAATGAATATCTGCAT 172069
||| || || || | ||| ||||||||
Sbjct 25313 AGTCAAAGTCTTGACGAAAATCTGCAT 25339
>seq3439
Length=31086
Score = 91.5 bits (100), Expect = 3e-13
Identities = 90/116 (78%), Gaps = 3/116 (3%)
Strand=Plus/Plus
Query 263831 TTACCACCCAAATTACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACT 263890
|||||| || | ||||| || |||||||| || ||||||| |||||||| || ||
Sbjct 10481 TTACCAGCC---TGACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACC 10537
Query 263891 AATTTAAAATCACCAAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACA 263946
| ||||||||| ||||| | |||||| | || | |||||| || |||||||||||
Sbjct 10538 AGTTTAAAATCTCCAAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACA 10593
Score = 89.7 bits (98), Expect = 9e-13
Identities = 131/182 (72%), Gaps = 10/182 (5%)
Strand=Plus/Plus
Query 87291 CCAATTACTAAATC---TTTTGCCACCCAAATTACATAATTTAGTTGCGTTAAAACAACC 87347
||||||| ||| | |||| ||| || | ||||| || || || || || | ||
Sbjct 10462 CCAATTATCAAAACGTTTTTTACCAGCC---TGACATAGCTTCGTAGCATTGAAGTATCC 10518
Query 87348 TGTATTTTTATCTATAACTAGTTTAAAATCACCAAATAAACCATAGTAATAATGGTCTTT 87407
||| ||||||||| || ||||||||||| ||||| | |||||| | || || |||||
Sbjct 10519 AGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCATACCAGTATTGATCTTT 10578
Query 87408 AATTTTCTCATAACATATATCTATTAGAGACAT--TTTCAAAGTT--TTATTTTTAATTA 87463
|||| |||||||||| ||| | ||||| || || |||| |||||| ||||||
Sbjct 10579 GATTTGTTCATAACATACATCGTTAAGAGATATGATTGTTGAGTTCATTATTTATAATTA 10638
Query 87464 TA 87465
||
Sbjct 10639 TA 10640
Score = 89.7 bits (98), Expect = 9e-13
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 265977 ACATAATTTAGTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACC 266036
||||| || |||||||| || ||||||| |||||||| || || | ||||||||| ||
Sbjct 10492 ACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCC 10551
Query 266037 AAATAAACCATAGTAATAATTATCTTTAATGTGTTCATAACA 266078
||| | |||||| | || | |||||| || |||||||||||
Sbjct 10552 AAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACA 10593
Score = 87.8 bits (96), Expect = 3e-12
Identities = 110/149 (74%), Gaps = 4/149 (3%)
Strand=Plus/Plus
Query 86208 ACATAATTTAGTTGCGTTAAAACAACCTGTATTTTTATCTATAACTAGTTTAAAATCACC 86267
||||| || || || || || | || ||| ||||||||| || ||||||||||| ||
Sbjct 10492 ACATAGCTTCGTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCC 10551
Query 86268 AAATAAACCATAGTAATAATGGTCTTTAATTTTCTCATAACATATATCTATTAGAGACAT 86327
||| | |||||| | || || ||||| |||| |||||||||| ||| | ||||| ||
Sbjct 10552 AAAGAGACCATACCAGTATTGATCTTTGATTTGTTCATAACATACATCGTTAAGAGATAT 10611
Query 86328 --TTTCAAAGTT--TTATTTTTAATTATA 86352
|| |||| |||||| ||||||||
Sbjct 10612 GATTGTTGAGTTCATTATTTATAATTATA 10640
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 264942 GTAGCATTAAAAAATCCAGTTGATTTATCAATAACTAATTTAAAATCACCAAATAAACCA 265001
|||||||| || ||||||| |||||||| || || | ||||||||| ||||| | ||||
Sbjct 10502 GTAGCATTGAAGTATCCAGTAGATTTATCTATGACCAGTTTAAAATCTCCAAAGAGACCA 10561
Query 265002 TAGTAATAATTATCTTTAATGTGTTCATAACA 265033
|| | || | |||||| || |||||||||||
Sbjct 10562 TACCAGTATTGATCTTTGATTTGTTCATAACA 10593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904855498353600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |