Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq2745 111 5e-20 >seq2745 Length=54617 Score = 111 bits (122), Expect = 5e-20 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40850 ||||||||||| | || |||||||| ||||| || || || ||||| || ||||| | Sbjct 47074 AAGTCGATGTCAAAGTCCGGCATGGAAACGCGTTCCGGATTAAGGAAACGTTCGAACAGC 47015 Query 40851 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40910 || | || |||||| | || |||||||| || | |||| || | ||||||| Sbjct 47014 AGGTTGAACTGCAGCGGATTAAGATCGGTGATAAAAAGCGCCCAGGCAACGACCGAACCG 46955 Query 40911 GCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAG 40970 || | || || || || || ||||| | || || |||||||| |||| ||| Sbjct 46954 GCACCTGATCCGCGTCCCGGACCGACAGGAATTCCTTTGGATTTCGCCCACTGGATAAAG 46895 Query 40971 TCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTA 41029 || || |||| || ||||| ||| || |||||||||||||| | |||||| || || Sbjct 46894 TCGGCAACGATCAGAAAGTATCCCGGAAATCCCATCTGGATGATAACGTCGATTTCATA 46836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164796268866656