Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021306.1
Length=75736
Score E
Sequences producing significant alignments: (Bits) Value
seq1070 165 4e-36
>seq1070
Length=478823
Score = 165 bits (182), Expect = 4e-36
Identities = 525/799 (66%), Gaps = 29/799 (4%)
Strand=Plus/Plus
Query 65059 TGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTA 65118
||||| || |||||| | || || ||| || |||| || ||||| | || || ||
Sbjct 111689 TGTGGCGGTAATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATA 111748
Query 65119 CCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTG 65178
|||| ||| |||| || ||||| |||||||| || ||||| || || | || |||
Sbjct 111749 TCCGAAGGGTAGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGC 111808
Query 65179 TCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGA 65238
|| || || | || | |||||||| || || || | ||| || | ||| || || ||
Sbjct 111809 CCTGCATGCAATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGA 111868
Query 65239 GCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGT 65298
||| | | || | || ||| || || || || || |||||||||| | |
Sbjct 111869 ACACGCTTTCGATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTAT 111928
Query 65299 GGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCT-- 65356
| || || |||| || || ||||| ||||| || | || ||| ||| ||||
Sbjct 111929 AGCGCAACCAGACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTC 111988
Query 65357 GGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTC 65416
||||| | || || || | ||||| || || || || ||| ||||| ||
Sbjct 111989 GGCGATAGAT--ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATC 112046
Query 65417 GAAGGCGACATCGGGGACAGTC--ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCA 65474
|| ||||| || |||| |||| | | ||||| || ||| | ||||||||||||||
Sbjct 112047 GAGGGCGATAT--GGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCAT 112104
Query 65475 TGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGT 65534
|||| || | || || | |||| | ||||| ||| | | | |||| ||||
Sbjct 112105 TGCGTAAATTAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGT 112164
Query 65535 TGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAACGAGACCACCACGGGCGGCA 65591
||||||| |||||||| || | ||||| |||| || || || || || || |
Sbjct 112165 TGCGCGACAAGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTA 112218
Query 65592 AGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG--TCGCATCGCCACCGAGAA 65649
| || |||| ||| ||||| || ||||| ||| |||| || ||| | ||
Sbjct 112219 ATGCATTGAAGTTTTACGCAAGTGTACGCATAGATATCCGAAAAGCGTCG--AGTATCAA 112276
Query 65650 GGAAGGCGATGAGGCTG-TCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGG 65708
||| ||||| | | | |||| | || | ||| || || || |||||||| |||
Sbjct 112277 GGACGGCGA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGG 112335
Query 65709 CCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG-CGTGAG 65767
||||||| ||| || ||||||||| | | ||||||| ||||| || ||| | ||
Sbjct 112336 CCCCGCCTTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTCGAAGATAG 112395
Query 65768 GTCGAACTCCTCGACCTGGCCGTGTCG--CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 65825
| ||| || | ||||| | |||||| | | | | | |||||| ||| | ||||
Sbjct 112396 G-CGAGATCATAGACCTTG--GTGTCGACCTGAACGTAATAAAGAAGAGCGGCTCTTGGT 112452
Query 65826 TCAAGTACGGGGACAAGAA 65844
|| ||||||||| | |||
Sbjct 112453 TCTCGTACGGGGAAATGAA 112471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242157209479064
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