Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021323.1 Length=45572 Score E Sequences producing significant alignments: (Bits) Value seq14302 96.9 1e-15 >seq14302 Length=8876 Score = 96.9 bits (106), Expect = 1e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 15826 TTACAGGTAAAGAAGC-TTATGAGGCATTACAAGGCGTTTGGCTAATGGAAATGGCAGAA 15884 |||| ||||||||||| ||| | |||| |||||| |||||| || || | | |||| Sbjct 8697 TTACGGGTAAAGAAGCCTTAGAAAGCAT-ACAAGGGTCTTGGCTTATTGAGTTAGGAGAA 8639 Query 15885 CTTGCAGCTACAAGAAAAGCTGAAGTTGAAGCTATTAAGCATTTCATATCTAAACAAGTT 15944 ||||| | | | ||||||||||| || || ||||||| ||| || |||| ||| Sbjct 8638 CTTGCCGGGTTACGTAAAGCTGAAGTAGACGCAGTTAAGCACTTCGTAAGTAAAAAAGAA 8579 Query 15945 GACCGATTTCGTGTTGCTTATGGGCATTATATTGAAGATTTTCCAAGGCAATGTATTTTC 16004 ||||| ||| | || ||||| || | | | ||| | || || ||| || | ||| Sbjct 8578 GACCGTTTTAGAGTGGCTTACGGCAAACGTGTAGAACACTTCCCCCGGCGTTGCGTCTTC 8519 Query 16005 ATTGGTACAACTAATAAAGTTGATTTCTTAAGAGA 16039 | || ||||||||| | | ||||| |||||||| Sbjct 8518 TTCGGAACAACTAATGAGGAAGATTTTTTAAGAGA 8484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145665902600736