Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021325.1
Length=39108
Score E
Sequences producing significant alignments: (Bits) Value
seq2824 125 2e-24
seq3213 113 1e-20
>seq2824
Length=48975
Score = 125 bits (138), Expect = 2e-24
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 38537 AATATAGCTTATGTAAGAGTTAGTACAGTAGAACAAAATGAAGAAAGACAATTAGAAGGA 38596
||||| |||||||| | || ||||||||| ||||| || | ||| ||| | || |
Sbjct 32204 AATATCGCTTATGTTCGGGTGTCTACAGTAGAGCAAAACGAGGCAAGGCAAATTGAGGCG 32263
Query 38597 TTaaaaaaaTATAACATAGAAAAATGGTTTACTGAAAAGATAAGTGCTAAAGATACTAAT 38656
|| |||| |||| ||||| || ||||||||||||||| |||| || |||||||| |||
Sbjct 32264 TTGGAAAAGCATAATATAGAGAAGTGGTTTACTGAAAAGGTAAGCGCAAAAGATACCAAT 32323
Query 38657 AGGCCACAATTAAAAGCCATGTTAGAATTTGCTAGAGAAGGAGA 38700
||||||||| || |||| |||||||| | || | ||||| ||
Sbjct 32324 AGGCCACAACTACAAGCTATGTTAGAGTACGCGCGCGAAGGCGA 32367
>seq3213
Length=2170589
Score = 113 bits (124), Expect = 1e-20
Identities = 245/364 (67%), Gaps = 2/364 (1%)
Strand=Plus/Minus
Query 38533 TATGAATATAGCTTATGTAAGAGTTAGTACAGTAGAACAAAATGAAGAAAGACAATTAGA 38592
|| ||| ||||| ||| | ||||| ||| |||||| |||||| || || ||| ||
Sbjct 1880384 TAAGAAAATAGCATATATCAGAGTCAGTTCAGTAGGGCAAAATATGGAGAGGCAAG-AGG 1880326
Query 38593 AGGATTaaaaaaaTATAAC-ATAGAAAAATGGTTTACTGAAAAGATAAGTGCTAAAGATA 38651
|| || ||| | | || || || | | | ||| | ||||||| ||||||
Sbjct 1880325 AGTCTTTGAAATCTTTCGGGATTGATAAGTATTATCGTGAGAGCGTAAGTGCAAAAGATG 1880266
Query 38652 CTAATAGGCCACAATTAAAAGCCATGTTAGAATTTGCTAGAGAAGGAGATACAATTTTTG 38711
|||| | || || || |||| ||| |||| |||| | | ||||| ||| ||| |
Sbjct 1880265 TTAATCGTCCGCAGTTGCAAGCAATGCTAGATTTTGTTCGTGAAGGCGATGTTGTTTATA 1880206
Query 38712 TTTGGGATTTTTCAAGACTAGCAAGAAGTACAAAGGATCTATTAGAATTAGTTGAAACTA 38771
||| |||||||||||| | |||||||| ||||||||| | || | | || || | |
Sbjct 1880205 TTTCTGATTTTTCAAGAATTGCAAGAAGCACAAAGGATTTGCTAAATATTGTGGATATTT 1880146
Query 38772 TGGAAGCTAAAGGAGTACATTTCAAAAGTATTAAAGAGAATTTAGATACTTCAACTCCTA 38831
|| | ||||| || | || || | ||||| || | ||||| | ||
Sbjct 1880145 TGAGATTAAAAGGTGTTGAATTGGTCAGCTTGAAAGAAAAGATTGATACAAATTCGCCAG 1880086
Query 38832 CTGGAAAGTTAATGTTAACTATGATAGGGGCAATTAATGAATTTGAAAGAAATAATATGC 38891
| ||||| |||||| | || ||||| || || ||| |||||||||||||| | ||| | |
Sbjct 1880085 CAGGAAAATTAATGCTCACGATGATTGGTGCTATTTATGAATTTGAAAGAGAAAATCTTC 1880026
Query 38892 TTGA 38895
||||
Sbjct 1880025 TTGA 1880022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124987192309280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |