Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq2745 113 1e-20
>seq2745
Length=54617
Score = 113 bits (124), Expect = 1e-20
Identities = 194/278 (70%), Gaps = 4/278 (1%)
Strand=Plus/Minus
Query 40214 GACGTACTGGATGACCTCGCCACGACGC-CG-GTCATCGAAGTCGATGTCGACATCGGGC 40271
||| || | ||||||||| |||| || || | || ||||||||||| | || |||
Sbjct 47111 GACATAATTGATGACCTCTTCACGGCGGTCGCGGCAA--AAGTCGATGTCAAAGTCCGGC 47054
Query 40272 ATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCG 40331
||||| ||||| || || || ||||| || ||||| | || | || |||||| |
Sbjct 47053 ATGGAAACGCGTTCCGGATTAAGGAAACGTTCGAACAGCAGGTTGAACTGCAGCGGATTA 46994
Query 40332 AGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGG 40391
|| |||||||| || | |||| || | ||||||||| | || || || || ||
Sbjct 46993 AGATCGGTGATAAAAAGCGCCCAGGCAACGACCGAACCGGCACCTGATCCGCGTCCCGGA 46934
Query 40392 CCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTAC 40451
||||| | || || |||||||| |||| ||||| || |||| || |||||
Sbjct 46933 CCGACAGGAATTCCTTTGGATTTCGCCCACTGGATAAAGTCGGCAACGATCAGAAAGTAT 46874
Query 40452 GACGGGAACCCCATCTGGATGATCATGTCGATCTCGTA 40489
||| || |||||||||||||| | |||||| || ||
Sbjct 46873 CCCGGAAATCCCATCTGGATGATAACGTCGATTTCATA 46836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163276716362256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |