Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq2745 113 1e-20 >seq2745 Length=54617 Score = 113 bits (124), Expect = 1e-20 Identities = 194/278 (70%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 40214 GACGTACTGGATGACCTCGCCACGACGC-CG-GTCATCGAAGTCGATGTCGACATCGGGC 40271 ||| || | ||||||||| |||| || || | || ||||||||||| | || ||| Sbjct 47111 GACATAATTGATGACCTCTTCACGGCGGTCGCGGCAA--AAGTCGATGTCAAAGTCCGGC 47054 Query 40272 ATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCG 40331 ||||| ||||| || || || ||||| || ||||| | || | || |||||| | Sbjct 47053 ATGGAAACGCGTTCCGGATTAAGGAAACGTTCGAACAGCAGGTTGAACTGCAGCGGATTA 46994 Query 40332 AGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGG 40391 || |||||||| || | |||| || | ||||||||| | || || || || || Sbjct 46993 AGATCGGTGATAAAAAGCGCCCAGGCAACGACCGAACCGGCACCTGATCCGCGTCCCGGA 46934 Query 40392 CCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTAC 40451 ||||| | || || |||||||| |||| ||||| || |||| || ||||| Sbjct 46933 CCGACAGGAATTCCTTTGGATTTCGCCCACTGGATAAAGTCGGCAACGATCAGAAAGTAT 46874 Query 40452 GACGGGAACCCCATCTGGATGATCATGTCGATCTCGTA 40489 ||| || |||||||||||||| | |||||| || || Sbjct 46873 CCCGGAAATCCCATCTGGATGATAACGTCGATTTCATA 46836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163276716362256