Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq1690 87.8 3e-12 seq9935 84.2 3e-11 >seq1690 Length=1574822 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 94236 TGGTGGAAATGACGAGACTCGAACTCGCAACCTCCTACTTGCAAGGCAGGTGCTCTCCCA 94295 ||||||| || | |||| |||||||| || |||| ||||||||||||||||||| ||| Sbjct 1439781 TGGTGGAGATTAGGAGAGTCGAACTCCTGACATCCTGCTTGCAAGGCAGGTGCTCTACCA 1439840 Query 94296 ATTGAGCTACATCCCCAT 94313 | ||||||| |||||||| Sbjct 1439841 ACTGAGCTAAATCCCCAT 1439858 >seq9935 Length=12840 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 94236 TGGTGGAAATGACGAGACTCGAACTCGCAACCTCCTACTTGCAAGGCAGGTGCTCTCCCA 94295 ||||||| |||| ||| |||||||| ||| ||| | ||||||||||||||||||||| Sbjct 5949 TGGTGGAGATGAGGAGGATCGAACTCCTGACCCCCTGCGTGCAAGGCAGGTGCTCTCCCA 6008 Query 94296 ATTGAGCTACATCCCCATT 94314 ||||||||| ||||||| Sbjct 6009 GCTGAGCTACACCCCCATT 6027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791661787958720