Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021530.1
Length=171407
Score E
Sequences producing significant alignments: (Bits) Value
seq1604 91.5 2e-13
seq4222 84.2 2e-11
seq1752 84.2 2e-11
seq1094 82.4 8e-11
>seq1604
Length=351056
Score = 91.5 bits (100), Expect = 2e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 155053 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAGTCCT 155112
||||||||||| |||||||||||||||||||||||||||| || | ||||||||| ||||
Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348
Query 155113 GTCTG 155117
| |||
Sbjct 255347 GACTG 255343
>seq4222
Length=21366
Score = 84.2 bits (92), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 155046 ACTGGGTCA-GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTT 155104
|| ||||| ||||||||| ||||||||||||| ||||||||||| || || ||||||||
Sbjct 17744 ACAGGGTCCCGTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCACAGGTT 17803
Query 155105 CGAGTCCTGTC 155115
||| |||||||
Sbjct 17804 CGAATCCTGTC 17814
>seq1752
Length=186427
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 155055 GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAGTCCTG 155113
||||||||| |||||||||||||||||||||||||||| || | ||||||||| |||||
Sbjct 14697 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCTG 14639
>seq1094
Length=2708314
Score = 82.4 bits (90), Expect = 8e-11
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 155053 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAGTCCT 155112
||||||||||| ||||||||||||| ||||||||| || || ||||||||||| ||||
Sbjct 606441 CAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGGGTCACAGGTTCGAATCCT 606500
Query 155113 GTCTG 155117
|||||
Sbjct 606501 GTCTG 606505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548204458773440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |