Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq1991 111 2e-19
seq373 105 1e-17
seq2441 104 3e-17
seq179 95.1 2e-14
seq2298 93.3 6e-14
seq1948 87.8 3e-12
>seq1991
Length=147557
Score = 111 bits (122), Expect = 2e-19
Identities = 176/248 (71%), Gaps = 6/248 (2%)
Strand=Plus/Minus
Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAAC 99005
|||| ||||| || || || |||||| | | | ||||| ||||||||||| || ||
Sbjct 6618 AAGAGCGACCGGACAGGAACGGGCACGATCAGTGTTTTCGGGCACCAGATGCGCTTTGAC 6559
Query 99006 TTGCAAGAAGG-TTTCCCG--CTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATC 99062
| | || || ||||||| ||| || | || | || || || ||||| || ||
Sbjct 6558 CTCAATGAGGGTTTTCCCGTACTGACCACAAAAAAAC--TG-CATCTACGCTCGATCATA 6502
Query 99063 CATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGT 99122
|||||||| |||||||| || || || || |||||||| | || || | ||||||
Sbjct 6501 CATGAACTTCTGTGGTTTCTCAAGGGAGATACCAATATAAAATATCTTCACGATAATAAC 6442
Query 99123 GTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAG 99182
|| || || |||||||| |||||||| | ||| |||| || ||||| ||||| |
Sbjct 6441 GTTACGATATGGGACGAGTGGGCGGATGCCGACGGCAACCTGGGCCCGGTCTACGGATAC 6382
Query 99183 CAGTGGCG 99190
||||||||
Sbjct 6381 CAGTGGCG 6374
>seq373
Length=1274844
Score = 105 bits (116), Expect = 1e-17
Identities = 181/260 (70%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAA- 99004
||| |||| ||||| || || || || | | | || || | || ||||| || ||
Sbjct 929023 AAGGAAGATCGTACAGGAACGGGTACTTATAGTGTATTTGGTTATCAAATGCGCTTTAAT 929082
Query 99005 CTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCA 99064
|| || || || || ||| | || || || || ||||| || || ||||||||
Sbjct 929083 CTAGCG-GATGGGTTTCCGTTAGTTACCACTAAAAAATGCCATCTTAAGTCGATTATCCA 929141
Query 99065 TGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGT 99124
||| | ||||||| || | ||||| |||||||| | ||||| ||||| ||||||||
Sbjct 929142 TGAGTTATTGTGGTTTTTGCAGGGCGATACCAATATTCGTTACCTTAAAGAAAATGGTGT 929201
Query 99125 AACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCA 99184
| |||||||| |||||||| || |||| || || | || || || || ||| | ||
Sbjct 929202 GAGTATTTGGGATGAATGGGCTGATGAAAACGGTGATTTAGGCCCTGTGTATGGTTATCA 929261
Query 99185 GTGGCGGGCATGGACTGCGC 99204
||||| ||||| | ||||
Sbjct 929262 ATGGCGTTCATGGCCAGCGC 929281
>seq2441
Length=2995558
Score = 104 bits (114), Expect = 3e-17
Identities = 174/252 (69%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 98950 AAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGC 99009
|||||||||| || ||||| || | | ||||| |||||||||||||| || |
Sbjct 2867131 AAGACCGTACAGGCACAGGAACAATCAGCGTATTCGGACACCAGATGCGTTTTGACCTTA 2867072
Query 99010 AAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAAC 99069
| || |||||||| | || |||||| |||||| || ||||| |||||||
Sbjct 2867071 ACGATGGTTTCCCATGCCTGACTACCAAGAAGCTTCACCTGAAATCCATTATTCATGAAC 2867012
Query 99070 TGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCA 99129
| || ||||| ||||||| || || ||| | ||||||| |||| || || ||| |
Sbjct 2867011 TTCTATGGTTTTTGAAAGGTGATACAAATGTTAAGTACCTCCAAGACAACGGAGTACGTA 2866952
Query 99130 TTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGC 99189
| ||| | |||||||| ||| | || || || | |||| || || || | || ||||
Sbjct 2866951 TCTGGAATGAATGGGCAGACGAGAACGGAGAATTAGGTCACGTTTATGGATACCAATGGC 2866892
Query 99190 GGGCATGGACTG 99201
| | ||| |||
Sbjct 2866891 GTTCCTGGCCTG 2866880
>seq179
Length=2312354
Score = 95.1 bits (104), Expect = 2e-14
Identities = 179/261 (69%), Gaps = 12/261 (5%)
Strand=Plus/Plus
Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTA---TCTTCGGCCACCAGATGCGTTTC 99002
|| ||||||||||| || ||||| ||| || | | ||||| |||||||| | ||
Sbjct 182147 AAAAAAGACCGTACAGGAACAGGAACG---TCCAGCGTTTTCGGTTACCAGATGAGATTT 182203
Query 99003 AACTTGCAAGAAGGTTTCCCG---CTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATT 99059
||| | || ||||| || ||| ||| ||| | || | | || | || ||
Sbjct 182204 AACCTTCAGGAAGGGTTTCCGTGTCTGACAACCAAAAAACTT---CATTTAAAATCAATA 182260
Query 99060 ATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAAT 99119
|| ||||| | | ||||| |||| || || |||||||| | || || || || ||
Sbjct 182261 ATTTATGAATTATTATGGTTTTTGAACGGAGATACCAATATAAAATATCTAAATGAACAT 182320
Query 99120 GGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGT 99179
|| |||| || ||| |||||||||| || |||| || |||||||| | ||||||||
Sbjct 182321 GGAGTAAAAATATGGAACGAATGGGCCGATGAAAACGGAGACCTCGGACATGTATACGGA 182380
Query 99180 AAGCAGTGGCGGGCATGGACT 99200
| || ||||| ||||| ||
Sbjct 182381 TATCAATGGCGTTCATGGCCT 182401
>seq2298
Length=83281
Score = 93.3 bits (102), Expect = 6e-14
Identities = 183/266 (69%), Gaps = 6/266 (2%)
Strand=Plus/Minus
Query 98883 TAAGGAA-CGACTATGAAACAGTATCAAGAT--TTAATGGCTGAAGTCTTTGCGAAAGGT 98939
|| |||| |||| |||||||| ||||||||| || | ||| | || | | || |||
Sbjct 73518 TACGGAATCGAC-ATGAAACAATATCAAGATCTTTTACGGC--ATGTTATGGATAACGGT 73462
Query 98940 ACGCCGAAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGT 98999
| || | |||||||| || || || || | | ||||| | || ||||||
Sbjct 73461 AACTTTAAAAGTGACCGTACGGGAACGGGTACAAAAAGTGTATTCGGATATCAAATGCGT 73402
Query 99000 TTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATT 99059
|| || ||| |||| |||||||| | ||||||| ||| || ||| || |||
Sbjct 73401 TTTAATTTGGAAGAGGGTTTCCCTGTTTTAACGACAAAGAAACTGCATCTGAAATCGATT 73342
Query 99060 ATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAAT 99119
|| |||| |||| ||||| | || || || |||||||| | || || |||||| |
Sbjct 73341 ATTTATGAGTTGCTATGGTTTTTAAAGGGTGATACCAATATTAAATATCTAAAAGATCAC 73282
Query 99120 GGTGTAACCATTTGGGACGAATGGGC 99145
|| || | |||||||||||||||||
Sbjct 73281 GGCGTTAGTATTTGGGACGAATGGGC 73256
>seq1948
Length=475166
Score = 87.8 bits (96), Expect = 3e-12
Identities = 164/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 98950 AAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGC 99009
||||||| ||||| || || || | | | || || ||||||||||| || ||| ||
Sbjct 215260 AAGACCGAACCGGAACCGGAACCTATAGTGTATTTGGTCACCAGATGCGGTTTAACATGG 215319
Query 99010 AAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAAC 99069
||||||| || || || | || ||||| | || || || ||||| | || |
Sbjct 215320 AAGAAGGATTTCCTTTGCTTACCACCAAAAAATTACATCTTAAATCGATTATATACGAGC 215379
Query 99070 TGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCA 99129
| |||||||| |||||||| ||||| || | || || ||||| ||||||| |
Sbjct 215380 TACTGTGGTTTCTGAAAGGAGACACGAACGCTAAATATTTGCAAGATCATGGTGTTCGTA 215439
Query 99130 TTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGC 99189
| ||| |||||||||| || | ||||| | || || | | ||||| | || ||||
Sbjct 215440 TCTGGAACGAATGGGCAGATGAGAATGGTAATCTTGGACATATTTACGGGTATCAATGGC 215499
Query 99190 G 99190
|
Sbjct 215500 G 215500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716414714255680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |