Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq373 104 1e-17 >seq373 Length=1274844 Score = 104 bits (114), Expect = 1e-17 Identities = 139/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 12462 TAGCTGCAATGATTCTTCCTCGTTCAGGTCTAGGCCATAAACATGGTGTAGTGCTTGGGA 12521 |||||||||||||| | || ||||| ||| ||||||||||||||||||| ||| | || | Sbjct 87845 TAGCTGCAATGATTTTACCACGTTCTGGTTTAGGCCATAAACATGGTGTTGTGTTGGGTA 87786 Query 12522 ACCTTACTGGTCTGATTGATTCAGATTATCAGGGTGAACTTATGGTAAGCCTCTGGAATC 12581 | | |||| | || ||||||||||| || || || | ||||| ||||||| Sbjct 87785 ATTTGGTTGGTTTAATCGATTCAGATTACCAAGGCGAGTTAATGGTTTCTTGTTGGAATC 87726 Query 12582 GCTCT-ACAGAGCCTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGTG 12640 || | ||| || | ||||| || ||| || |||||||| ||| ||||| | ||| Sbjct 87725 GCGGTAACACAG-CGTTTACCATTGCTATTGGCGAGCGTATTGCACAGTTGGTATTAGTG 87667 Query 12641 CCTGTAATGCA 12651 || || |||| Sbjct 87666 CCAGTGGTGCA 87656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231466040818760