Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021788.1 Length=145865 Score E Sequences producing significant alignments: (Bits) Value seq1191 93.3 4e-14 >seq1191 Length=1801643 Score = 93.3 bits (102), Expect = 4e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 15606 CCCCAAGTTAAAAACTCTTCTACATTTTCAATGTATAAATATGTAGGGTTTAAT-TCTTC 15664 ||||| | | ||||||||||||||||||||| | | ||| || |||| ||| | || Sbjct 1471931 CCCCACGACATAAACTCTTCTACATTTTCAATCTGAATATA-GTCAGGTTCAATAGCGTC 1471989 Query 15665 AACATAGAAAAATAAATGTTGAGCTAAAGTCCTGCTGTCTGCATCTCTAGCTAAGCCTCC 15724 || ||| |||||||||| ||| | || | |||||| ||||| | || ||| || || Sbjct 1471990 AATATATCTGAATAAATGTTCAGCAAGTGTACGGCTGTCGGCATCGCGAGGTAAACCGCC 1472049 Query 15725 TTTAGCTTTTGAAAAGTGCGTACACTCTAA 15754 ||| ||||| || |||| |||||||| || Sbjct 1472050 TTTTGCTTTAGAGAAGTTGGTACACTCCAA 1472079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466495388264000