Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021796.1
Length=72534
Score E
Sequences producing significant alignments: (Bits) Value
seq385 172 3e-38
>seq385
Length=1145925
Score = 172 bits (190), Expect = 3e-38
Identities = 479/728 (66%), Gaps = 20/728 (3%)
Strand=Plus/Minus
Query 19281 TCACCTGCCATTATGCTTCCATAAGGCATTATTTTATCTAATACGTCTCCAAGTCCAAAA 19340
|| || ||||| || | ||| ||||| || || | ||||| || || ||||| || ||
Sbjct 548711 TCTCCAGCCATAATACATCCGTAAGGGATGATCTCATCTACCACTTCGCCAAGCCCGAAT 548652
Query 19341 CTCTCCATTTGGTCTTGTACTGTATCTGCGTTCTTATAAGCGGATGGCAACTCAGAGATA 19400
|| ||| |||| | ||| | || || |||||||| || || ||||| || |||
Sbjct 548651 TCCTTCATCTGGTTCTTTACATTTTCCGCATTCTTATAGGCACTCGGTAACTCTGAAATA 548592
Query 19401 TCTATCTCTCCTGAGAAGAATCTTATATCTAACCCTGCAGTCTCGTCTTTGAATATCTGA 19460
|| || | ||| ||||| || | ||| | ||| || || || |||||| |
Sbjct 548591 TCGATATGGTTTGAAAAGAACCTCACATCCAGTCCTTTGGTTTCTTCCCGGAATATTTCT 548532
Query 19461 GGG-TTGCTCTTGGCTGACATACTTCTCTTATGTGCTGCTCTACTTACATTTCTACCTGC 19519
||| ||| || | || |||| | ||| ||| | | || | |||||| || ||
Sbjct 548531 TCAATTGTTCTATGCGCAT-TATTTCTATGATGCGCTCCCCGGCTGATATTTCTTCCAGC 548473
Query 19520 ACCGTGTGGAGCAAATCCTAAGTTTGTTCTTGTAGTTTTTCCTTTTACTATTAGTATAGG 19579
||||| || |||||||| | ||| || ||| || |||||||| || || | | ||
Sbjct 548472 TCCGTGGGGTGCAAATCCCAGGTTATTTGCTGTGGTCTTTCCTTTCACGATCAAAACCGG 548413
Query 19580 CTCTGCCATGTTTAAAGGTATTAGTCTTAGACCCTCTGTAGAATCCGGTACAAACTTATC 19639
|| ||| || || || |||| | || || | | | |||||||| || || |||||
Sbjct 548412 CTGGCTCATATTCAACGGAATTAAACGTAATCCATTTTTTGAATCCGGCACGAATTTATC 548353
Query 19640 ATCTAAAGGGGTTGCGCCTTTGGCATGGTAGAACTTATCTCCGTCCTTGAATACAAAATT 19699
|| | || ||||||||||||||||| || ||| |||||| || ||||| ||||||||
Sbjct 548352 GTCAAGCGGCGTTGCGCCTTTGGCATGATAAAACAGATCTCCTTCTTTGAAAACAAAATT 548293
Query 19700 GTGCTCATTCCAAA-------AAGATCTTATTGGAGTA-GTCTTCAACTTGTTTGCTACC 19751
|| |||||||| | |||| || | || || | ||| ||| | ||
Sbjct 548292 ATGTTCATTCCAGAAACGGTCAAGAACTGAACGGTTTATTTTTTCTACT--GTAGC---- 548239
Query 19752 CTATTGTGTATAGAAGAGTGGTTTAATTTAGTCCATTCTCTTAGTATTTGCAAAGCCTCC 19811
|| ||| || | | || || | || |||||||| |||| | ||| | || |||
Sbjct 548238 --ATCGTGAATTGTCGTATGATTCATCTTCGTCCATTCCCTTACAAGTTGAAGCGCTTCC 548181
Query 19812 CAATACAACTCTCCTTCTTTTTCTTCAAAAGGTATCCAAGCATTCATCGGGTCTGTTTTA 19871
||||| || |||||| | ||| | || ||||| ||||| ||| | |||||||
Sbjct 548180 CAATAAGCCTTTCCTTCATAGGTATCATACGGGATCCATGCATTTTTCGCATGTGTTTTA 548121
Query 19872 GGGCTTAATTGCTTTCTAAATCTCTCTGCGGTATGCATCCCTTTTTTATAGACACTAGAA 19931
||| | | |||||| ||| || || | |||||||| | |||| | ||
Sbjct 548120 GGGGAAATCTCCTTTCTGAATGCTTCGGCCACCTTCATCCCTTGTGTATACAGGTAAGCT 548061
Query 19932 CCAAACCCTCTAGACCCATGGTGCGTTACCATCATCGTTCTTCCGGTAGCTTCT-GACAC 19990
|| || || | || ||||| || |||||||| ||| |||||| |||| |||
Sbjct 548060 CCGAATCCCCGGCTTCCGTGGTGAGTAACCATCATGGTTTCCCCGGTA-TTTCTGGACTG 548002
Query 19991 CCCTACGA 19998
|||||||
Sbjct 548001 TCCTACGA 547994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 231913905454440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |