Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021796.1 Length=72534 Score E Sequences producing significant alignments: (Bits) Value seq385 172 3e-38 >seq385 Length=1145925 Score = 172 bits (190), Expect = 3e-38 Identities = 479/728 (66%), Gaps = 20/728 (3%) Strand=Plus/Minus Query 19281 TCACCTGCCATTATGCTTCCATAAGGCATTATTTTATCTAATACGTCTCCAAGTCCAAAA 19340 || || ||||| || | ||| ||||| || || | ||||| || || ||||| || || Sbjct 548711 TCTCCAGCCATAATACATCCGTAAGGGATGATCTCATCTACCACTTCGCCAAGCCCGAAT 548652 Query 19341 CTCTCCATTTGGTCTTGTACTGTATCTGCGTTCTTATAAGCGGATGGCAACTCAGAGATA 19400 || ||| |||| | ||| | || || |||||||| || || ||||| || ||| Sbjct 548651 TCCTTCATCTGGTTCTTTACATTTTCCGCATTCTTATAGGCACTCGGTAACTCTGAAATA 548592 Query 19401 TCTATCTCTCCTGAGAAGAATCTTATATCTAACCCTGCAGTCTCGTCTTTGAATATCTGA 19460 || || | ||| ||||| || | ||| | ||| || || || |||||| | Sbjct 548591 TCGATATGGTTTGAAAAGAACCTCACATCCAGTCCTTTGGTTTCTTCCCGGAATATTTCT 548532 Query 19461 GGG-TTGCTCTTGGCTGACATACTTCTCTTATGTGCTGCTCTACTTACATTTCTACCTGC 19519 ||| ||| || | || |||| | ||| ||| | | || | |||||| || || Sbjct 548531 TCAATTGTTCTATGCGCAT-TATTTCTATGATGCGCTCCCCGGCTGATATTTCTTCCAGC 548473 Query 19520 ACCGTGTGGAGCAAATCCTAAGTTTGTTCTTGTAGTTTTTCCTTTTACTATTAGTATAGG 19579 ||||| || |||||||| | ||| || ||| || |||||||| || || | | || Sbjct 548472 TCCGTGGGGTGCAAATCCCAGGTTATTTGCTGTGGTCTTTCCTTTCACGATCAAAACCGG 548413 Query 19580 CTCTGCCATGTTTAAAGGTATTAGTCTTAGACCCTCTGTAGAATCCGGTACAAACTTATC 19639 || ||| || || || |||| | || || | | | |||||||| || || ||||| Sbjct 548412 CTGGCTCATATTCAACGGAATTAAACGTAATCCATTTTTTGAATCCGGCACGAATTTATC 548353 Query 19640 ATCTAAAGGGGTTGCGCCTTTGGCATGGTAGAACTTATCTCCGTCCTTGAATACAAAATT 19699 || | || ||||||||||||||||| || ||| |||||| || ||||| |||||||| Sbjct 548352 GTCAAGCGGCGTTGCGCCTTTGGCATGATAAAACAGATCTCCTTCTTTGAAAACAAAATT 548293 Query 19700 GTGCTCATTCCAAA-------AAGATCTTATTGGAGTA-GTCTTCAACTTGTTTGCTACC 19751 || |||||||| | |||| || | || || | ||| ||| | || Sbjct 548292 ATGTTCATTCCAGAAACGGTCAAGAACTGAACGGTTTATTTTTTCTACT--GTAGC---- 548239 Query 19752 CTATTGTGTATAGAAGAGTGGTTTAATTTAGTCCATTCTCTTAGTATTTGCAAAGCCTCC 19811 || ||| || | | || || | || |||||||| |||| | ||| | || ||| Sbjct 548238 --ATCGTGAATTGTCGTATGATTCATCTTCGTCCATTCCCTTACAAGTTGAAGCGCTTCC 548181 Query 19812 CAATACAACTCTCCTTCTTTTTCTTCAAAAGGTATCCAAGCATTCATCGGGTCTGTTTTA 19871 ||||| || |||||| | ||| | || ||||| ||||| ||| | ||||||| Sbjct 548180 CAATAAGCCTTTCCTTCATAGGTATCATACGGGATCCATGCATTTTTCGCATGTGTTTTA 548121 Query 19872 GGGCTTAATTGCTTTCTAAATCTCTCTGCGGTATGCATCCCTTTTTTATAGACACTAGAA 19931 ||| | | |||||| ||| || || | |||||||| | |||| | || Sbjct 548120 GGGGAAATCTCCTTTCTGAATGCTTCGGCCACCTTCATCCCTTGTGTATACAGGTAAGCT 548061 Query 19932 CCAAACCCTCTAGACCCATGGTGCGTTACCATCATCGTTCTTCCGGTAGCTTCT-GACAC 19990 || || || | || ||||| || |||||||| ||| |||||| |||| ||| Sbjct 548060 CCGAATCCCCGGCTTCCGTGGTGAGTAACCATCATGGTTTCCCCGGTA-TTTCTGGACTG 548002 Query 19991 CCCTACGA 19998 ||||||| Sbjct 548001 TCCTACGA 547994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231913905454440