Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021798.1 Length=145343 Score E Sequences producing significant alignments: (Bits) Value seq1191 82.4 7e-11 >seq1191 Length=1801643 Score = 82.4 bits (90), Expect = 7e-11 Identities = 124/174 (71%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 15582 GGTCTACCTTTTTCATTTAAAGGGCCCCAAGTTAAAAACTCCTCTACATTTTCAATGTAT 15641 ||| | |||||||| | | |||||| | | |||||| |||||||||||||| | Sbjct 1471907 GGTTTTCCTTTTTCGTCCAGGTCGCCCCACGACATAAACTCTTCTACATTTTCAATCTGA 1471966 Query 15642 AAATATGTAGGGTTTAAT-TCTTCAACATAGAAAAATAAATGCTGAGCTAAAGTCCTGCT 15700 | ||| || |||| ||| | |||| ||| |||||||| | ||| | || | ||| Sbjct 1471967 ATATA-GTCAGGTTCAATAGCGTCAATATATCTGAATAAATGTTCAGCAAGTGTACGGCT 1472025 Query 15701 GTCTGCATCTCTAGCTAAGCCTCCTTTAGCTTTTGAAAAGTGTGTGCACTCTAA 15754 ||| ||||| | || ||| || ||||| ||||| || |||| || ||||| || Sbjct 1472026 GTCGGCATCGCGAGGTAAACCGCCTTTTGCTTTAGAGAAGTTGGTACACTCCAA 1472079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464825505920960