Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021802.1
Length=53664
Score E
Sequences producing significant alignments: (Bits) Value
seq3099 87.8 6e-13
>seq3099
Length=1637421
Score = 87.8 bits (96), Expect = 6e-13
Identities = 198/293 (68%), Gaps = 15/293 (5%)
Strand=Plus/Minus
Query 9424 AATTAAAATTAAAAACTAATGA---TACTAAGACGATTAGGCAACAAAAAGAAAATAGCT 9480
||||| | | |||| | |||| || ||||| ||||||| |||||| ||| |||||
Sbjct 304306 AATTAGAGTATAAAAATTATGACTTTATTAAGAAGATTAGGAAACAAATCGAAGATAGCA 304247
Query 9481 AGTGAAATACAAAAACATTTTCC--GCCACATAAAATTTACATAGAGCCtttttttGGTG 9538
| || | || ||||||| |||||| ||| |||| |||| ||||| || |
Sbjct 304246 AAAGATGTGCAGTCGTATTTTCCACGCCACAAGCAAT--ACATTGAGCTGTTTTTCGGGG 304189
Query 9539 CTGGAGGTATGTTCTTTAATAAACCAAAAGCAAAGTATAATATTGTAAACGATTTAGATT 9598
| || || ||||| || |||||||| ||||| || ||||| || || |||||| | ||
Sbjct 304188 CGGGCGGGATGTTTTTCAATAAACCCAAAGCCAAATATAACATCGTCAACGATATGGACA 304129
Query 9599 CTGACGTGTTTAATTTGTTTCAAGTTGTAATGAACCAAAAAGAAGAACT---AGAAAAGG 9655
|| || | ||| ||||| ||||||| || | ||| || || |||| |
Sbjct 304128 GCGAGGTATATAACCTGTTTTGCGTTGTAAAAGACAATAAAAGCGACCTGATAGAATA-- 304071
Query 9656 CTTTTTACATG-ATGCCTATACATTCTGATTTATTAGATTACTGGAAAAAGAA 9707
| | | | | ||||| ||||| | || || | || || |||||||||||
Sbjct 304070 --TATCAAACGCATGCCCATACACGCCGACTTGTGGGAGTATTGGAAAAAGAA 304020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 171552679159904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |