Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq12076 96.9 6e-16 >seq12076 Length=43286 Score = 96.9 bits (106), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 26475 ATATCAAGAAGGTTAAAAATGTTAGCTAAAGAACTGCAGGTGCCTATAATTGCTTTATGT 26534 ||||||||| | ||||||| | | |||| || || | ||||| | || || | | | Sbjct 27688 ATATCAAGAGGATTAAAAACGCTTGCTAGGGAGCTTGACGTGCCCGTCATCGCACTTTCT 27747 Query 26535 CAATTATCTAGGGCTGTAGAAACTCGTGGTGGTTCTAAACGTCCTTTGTTATCAGATTTG 26594 ||||| || |||| || || | || | | ||||| || ||||||| ||||| Sbjct 27748 CAATTGTCGCGGGCAGTTGAGAGCCGGACAGAT---AAACGCCCGATGTTATCGGATTTA 27804 Query 26595 CGTGAATCAGGTGCAATAGAGCAGGATGCAGATATAGTAGAGTTTATTTATAGACCAGAT 26654 | |||||||| || ||||||||||| ||||||||||| |||||||||| | || Sbjct 27805 AGAGAATCAGGGGCGATAGAGCAGGACGCAGATATAGTTATGTTTATTTATCGCGATGAA 27864 Query 26655 TATTATAAAATAGA 26668 ||||| |||| ||| Sbjct 27865 TATTACAAAAAAGA 27878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91883341118688